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Domain assignment for gi|50954610|ref|YP_061898.1| from Leifsonia xyli subsp. xyli str. CTCB07

Domain architecture


Domain assignment details

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Strong hits

Sequence:  gi|50954610|ref|YP_061898.1|
Domain Number 1 Region: 7-152
Classification Level Classification E-value
Superfamily Ribosomal protein S5 domain 2-like 1.67e-43
Family Ribonuclease PH domain 1-like 0.000000582
Further Details:      
 
Domain Number 2 Region: 339-510
Classification Level Classification E-value
Superfamily Ribosomal protein S5 domain 2-like 8.1e-43
Family Ribonuclease PH domain 1-like 0.000000623
Further Details:      
 
Domain Number 3 Region: 492-591
Classification Level Classification E-value
Superfamily Ribonuclease PH domain 2-like 3.57e-22
Family Ribonuclease PH domain 2-like 0.000021
Further Details:      
 
Domain Number 4 Region: 153-272
Classification Level Classification E-value
Superfamily Ribonuclease PH domain 2-like 3.34e-21
Family Ribonuclease PH domain 2-like 0.0000201
Further Details:      
 
Domain Number 5 Region: 596-706
Classification Level Classification E-value
Superfamily Eukaryotic type KH-domain (KH-domain type I) 3.79e-17
Family Eukaryotic type KH-domain (KH-domain type I) 0.0037
Further Details:      
 
Domain Number 6 Region: 277-363
Classification Level Classification E-value
Superfamily Polynucleotide phosphorylase/guanosine pentaphosphate synthase (PNPase/GPSI), domain 3 0.00000000000000175
Family Polynucleotide phosphorylase/guanosine pentaphosphate synthase (PNPase/GPSI), domain 3 0.0024
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Cellular Component IC (bits) H-Score
Biological Process IC (bits) H-Score
Molecular Function IC (bits) H-Score

Protein sequence

External link(s) gi|50954610|ref|YP_061898.1|
Sequence length 761
Comment polynucleotide phosphorylase [Leifsonia xyli subsp. xyli str. CTCB07]
Sequence
MEGPEITFAEAMLDNGRFGARTVRFETGRIAQQAQGAVAAYLDEETMLLSATSASKHPKD
NFDFFPLTVDVEERSYAAGKIPGSFFRREGRPSTEAILVCRLIDRPLRPSFVDGLRNEVQ
IVVTVLSIAPDEFYDALAINAASASTQISGLPFSGPIAGVRLALIPGNGAHEDQWVAFPK
ASQLEEAVFDLIVVGRVLTNEDGTEGDVAIMMVEAEATEGSWNLIQGGAVKPNEEVVAQG
LEAAKPFIRQLVGAQAALAKQSAKAIADYPVFLPYSQETYDSVAALAYDELVNVYQIADK
VERQNADDALKERVKAALAEKAQAGALDAEALTQFSAAYKSVSKVVMRGRVLREGVRIDG
RGLTDIRPLDAEVQIIPRVHGSAVFQRGETQILGVTTLNMLKMEQQIDSLSPVTKKRYLH
HYNFPPYSTGETGRVGSPKRREIGHGFLAERALVPVLPSREEFPYAIRQVSEALSSNGST
SMGSVCASTLSLLNAGVPLRAPVAGIAMGLISDVIDGETRYAALTDILGAEDALGDMDFK
VAGTSEFVTAIQLDTKLDGIPSSVLASALKQAKDARTTILSVLDAAIDAPDEMAPTAPRV
ISVQIPVDKIGELIGPKGKTINAIQDETGADISIDEDGTVYIGAVDGPSAEAARAQVNVI
ANPTNPEVGEQFLGTVVKNAAFGAFVSLLPGKDGLLHISEVRKLAGGKRVESVDDVLSIG
QKILVEITKIDDRGKLSLAPVLADEAETHGHDAASEGPTEG
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Identical sequences A0A1E2SI34 Q6AFQ2
281090.Lxx09030 gi|50954610|ref|YP_061898.1| WP_011185791.1.68452 WP_011185791.1.84704

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