SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for SMAR008722-PA from Strigamia maritima 22

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  SMAR008722-PA
Domain Number 1 Region: 6-255
Classification Level Classification E-value
Superfamily Class II aaRS and biotin synthetases 7.95e-95
Family Class II aminoacyl-tRNA synthetase (aaRS)-like, catalytic domain 0.000000339
Further Details:      
 
Domain Number 2 Region: 256-466
Classification Level Classification E-value
Superfamily Putative anticodon-binding domain of alanyl-tRNA synthetase (AlaRS) 1.44e-57
Family Putative anticodon-binding domain of alanyl-tRNA synthetase (AlaRS) 0.0000251
Further Details:      
 
Domain Number 3 Region: 595-758
Classification Level Classification E-value
Superfamily ThrRS/AlaRS common domain 1.14e-37
Family AlaX-like 0.062
Further Details:      
 
Domain Number 4 Region: 511-589
Classification Level Classification E-value
Superfamily Translation proteins 0.00000000000162
Family AlaX-M N-terminal domain-like 0.018
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Biological Process IC (bits) H-Score
Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score

Protein sequence

External link(s) SMAR008722-PA
Sequence length 963
Comment pep:novel scaffold:Smar1:JH431850:554691:558765:-1 gene:SMAR008722 transcript:SMAR008722-RA description:""
Sequence
MNASLTSKQIRQMFLDFFTEKYNHTYVHSSVVIPYDDPTLLFANAGMNQFKPIFLGSVDP
NSQMSKWVRAVNTQKCIRAGGKHNDLDDVGKDVYHHTFFEMLGNWSFGDYFKLEVCNWAW
ELLTEVYKIPKDRLYVTYFGGQPEMGLEPDNECRDIWLSPDRILPFGMKDNFWEMGETGP
CGPCSEIHFDRIGNRDAKDLVNADVPDVLEIWNLVFIQFNRETDGSLRPLPKKHIDCGMG
LERLVSVIQQKSSNYDTDFFVPIFNAIQQATNGAPYGGRVGDEDVNSIDMAYRVLADHVR
TITIALSDGGRPDNTGRGYVLRRILRRAVRYAHEKLNAKPGLFSSLVDVVVENLGSTFPE
ITKDPELVKEIINEEENQFLKTLTRGHILIERTMAKMPAGINVFPGDLAWRLYDTYGFPI
DLTQLMTIEKGMTVDMDGYEGAKKAAQLMSQGKGGGVEDELKLDIHAIAELQDMKVPATD
DSYKYNYVADENSEYKFEPFTGAIVALRKNKTFVEEISDGGECGVIFDCTCFYAEQGGQT
YDEGFMVKECDGGQNDDEAEFKVKNVQVKGGYILHIGNIEGKLKVGDKMKMLNKRRLVMN
NHTGTHVLNFALRQVLTADADQKGSLVAPNRLRFDFTAKSAMTPKQVKDTETIANEMIAK
NEAVYAKEAPLAAAKAIQGLRAMFSETYPDPVRIVSIGIPVEDLLDDPLGPGGNKTSVEF
CGGTHLIRCGHIGDFVIASEEAIAAGNRRIVALTGPEATKARNKAALLQNNVNKLKLLIN
DNNESSNVIGKQIVGLDNDISQATIPHWSKDELRSELKKLKKILDDKDKSKKASIALEVI
EQTKMLFGNDANRPVIVHKFEAGANKKALDGALKQVKLLSPQTAAMFFSSDAESEKIICL
SSVPKDVVGKGLKANEWVDKISGIIDGKGGGKEESAQATGNKISALNEAMEAAKEFAKLK
LNN
Download sequence
Identical sequences T1J525
SMAR008722-PA

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]