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Domain assignment for SMAR002622-PA from Strigamia maritima 22

Domain architecture


Domain assignment details

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Strong hits

Sequence:  SMAR002622-PA
Domain Number 1 Region: 144-382
Classification Level Classification E-value
Superfamily Nuclear receptor ligand-binding domain 4.33e-64
Family Nuclear receptor ligand-binding domain 0.0000273
Further Details:      
 
Domain Number 2 Region: 37-124
Classification Level Classification E-value
Superfamily Glucocorticoid receptor-like (DNA-binding domain) 3.77e-29
Family Nuclear receptor 0.0000354
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score
Biological Process IC (bits) H-Score

Protein sequence

External link(s) SMAR002622-PA
Sequence length 848
Comment pep:novel scaffold:Smar1:JH431195:37611:53166:-1 gene:SMAR002622 transcript:SMAR002622-RA description:""
Sequence
MILTEKDLQLLKTLSSSVQEQTKKEPELKIEFDGTTVLCRVCGDKASGFHYGVHSCEGCK
GFFRRSIQQKIQYRPCTKNQQCSILRINRNRCQYCRLKKCIAVGMSRDAVRFGRVPKREK
AKILAAMHNTNARAQERALTAELEDEVRLVAIVIKAHEQTCDYTQEKVAFLLQRAVEDPI
YTQCPTQLACPLNPNPQPLQNGILEDFSERFSPAIRGVVEFAKRIPGFSLLTQDDQVTLL
KAGVFEVLLVRLACMFNAKNNTMLCLNGQVLKRESLHSSSNARFLMDSMFDFAERLNQLR
LGDNDLGLFCAVVIIAADRPGLRNVELVEKMQCKLMQALQTAVAKSHVDSPNMFQELIKK
IPDLRTLNTLHSEKLLAFKMEPRHQDATVSALSVSVLNNYMATPGWGMDNGNQGGHQRST
ASDDSKSSWSDRELMARSPGQRSSAGSEWSLPESKEMDRDATTPSYGSEERGEKSPMGSE
SVCSNEVALITDLPGKKRSVESLEGCTSSGDEGSVSDGQLGRRCPFKMRKLESPCDSGIE
SGKEAGSTNGTSLCGSPRSLVEEKVKEMEESTIDDMPVLKRALQAPPLVNTNLLMDEAYK
PHKKFRALRKEPSCETQPASPEIQTRHHQNSAGSLASSHSMLVRTLEQGPRLTEQQMKHT
DIIHNYIMADNGNRSPVCDASRHSQSPQHSQYVSSAVVSQSNGHSKGLVACPPNFYIPQS
QSPNYAWPFGTQVRPAATYVPNVQSMTAPQSRLMPLSPQPAGAASPQLPRMYYDPRNTTP
STTPPAVPMVSAYLNFGGAMNKCVAPKSVSPLAGQVVELQMGGENQPLNLSKKVVLSHLH
HKVKVEST
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Identical sequences T1INN9
SMAR002622-PA

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