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Domain assignment for SMAR006046-PA from Strigamia maritima 22

Domain architecture


Domain assignment details

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Strong hits

Sequence:  SMAR006046-PA
Domain Number 1 Region: 300-336,409-608
Classification Level Classification E-value
Superfamily Nuclear receptor ligand-binding domain 2.62e-66
Family Nuclear receptor ligand-binding domain 0.0000263
Further Details:      
 
Domain Number 2 Region: 247-327
Classification Level Classification E-value
Superfamily Glucocorticoid receptor-like (DNA-binding domain) 1.95e-27
Family Nuclear receptor 0.0000529
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Cellular Component IC (bits) H-Score
Biological Process IC (bits) H-Score
Molecular Function IC (bits) H-Score

Protein sequence

External link(s) SMAR006046-PA
Sequence length 618
Comment pep:novel scaffold:Smar1:JH431663:85581:98624:1 gene:SMAR006046 transcript:SMAR006046-RA description:""
Sequence
MEAESSTKSKRAQVVPATSSVCTVRSIKGEPPSPERESDGDCADVESSNVVTSPTPDIPE
RNRGWMGKTGSWKSVILKIFVSXFWGGGDAVRCCFSRIRRRISVIMEVVFKTEFTGAPTV
SMSSDTSSATSYDPSADFALAFYEGTAKKEDFEEKATCIYDAGTTHVTPDTLYVDCGPYT
TLDRGVGLDIAQPMEASPSSQGITLLYDQKMTSSHTILKHQPSKPMHKPDPNFAAADSNS
STPSKTFVPCKVCGDKASGYHYGVTSCEGCKGFFRRSIQKQIEYRCLRDGKCLVIRLNRN
RCQYCRFKKCLSVGMSRDSVRYGRVPKRPRPQNEEARVTQSEADQSAREMENKQLAIYDT
ILTISQAHHANCAYTEEKLRGLVRKLAVFSLNDGSQDGDDVSGAVDSLEQQKIVMWQHFA
MFVTPSIQRVVEFAKRVPGFSDLSQDDQLILIKCGFLEVWLVHVSKMINHMDNTLTFNDG
NYITKQQLDLMFDEEFTALLFNYSVQFNTMKLNDTEMGLFSAIVLLTSDRPGITDQKHIE
QQQDKLMEALKLQIARNRGSDVLPFSTILMKIPELRSLGSKHSEHLNWFRQNWAKLKLPP
LYAEIFDIPKCEEDLQYV
Download sequence
Identical sequences T1IXV1
SMAR006046-PA

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