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Domain assignment for SMAR012229-PA from Strigamia maritima 22

Domain architecture


Domain assignment details

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Strong hits

Sequence:  SMAR012229-PA
Domain Number 1 Region: 354-612
Classification Level Classification E-value
Superfamily Nuclear receptor ligand-binding domain 9.44e-64
Family Nuclear receptor ligand-binding domain 0.0000000302
Further Details:      
 
Domain Number 2 Region: 280-359
Classification Level Classification E-value
Superfamily Glucocorticoid receptor-like (DNA-binding domain) 1.63e-27
Family Nuclear receptor 0.000014
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score
Biological Process IC (bits) H-Score

Protein sequence

External link(s) SMAR012229-PA
Sequence length 618
Comment pep:novel scaffold:Smar1:JH432122:853:6878:1 gene:SMAR012229 transcript:SMAR012229-RA description:""
Sequence
MKLHFSTTDTNKYYFPLQSPAFSTSPTLTFASSDPLTSVSFSLSAFGEEANYSTSPQQPE
VVSSQFHQTEFVDVFPTEFLAGLTASSPSPATTLPSFQETYSPRYRRDSQPEVGVFSYPS
HTPSPPTQVASPPAFVDPFATVAEFYKPAHATSKQPPSATYVPGLTAPAAPSTATFGQAV
FGCAEFPHRFAAPVQSAAQTEFGGLTSAETGFLQGAPSFSSQDLPGPSGVARRPRRPSLT
LQSSDPGVDVQKLRMQSPTTPSTPSSTRSSPTQDKPQSPSQLCAVCGDNAACQHYGVRTC
EGCKGFFKRTVQKGAKYVCLANKDCPVDKRRRNRCQFCRFQKCLVVGMVKEVVRTDNLKG
RRGRLPSKPKSPQESPPSPPVSLITALVRAHVDTTPDLANLDLTHYRECSSGAESPSSEI
EQIQRFYNLLTSSIDVIKTFADKIPGFADLCRDDQDLLFQSASLELFVLRLSYRTKPSDV
TFTFCNGMVLHREQCQRSFGDWLPAINDFSYSLHSMELDISAFACLCALALVTERHGLRD
PKKVELLQMKIIASLRDHVTYNSEAQKKPHYFSHILSKLPELRSLSVQGLQRIFYLKLED
IVPAPSLIENMFVSSLPY
Download sequence
Identical sequences T1JEI3
SMAR012229-PA

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