SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for gi|392378508|ref|YP_004985668.1| from Azospirillum brasilense Sp245

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  gi|392378508|ref|YP_004985668.1|
Domain Number 1 Region: 73-168
Classification Level Classification E-value
Superfamily Collagen-binding domain 0.0000144
Family Collagen-binding domain 0.01
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Molecular Function IC (bits) H-Score
Cellular Component IC (bits) H-Score
Biological Process IC (bits) H-Score

Protein sequence

External link(s) gi|392378508|ref|YP_004985668.1|
Sequence length 238
Comment conserved protein of unknown function [Azospirillum brasilense Sp245]
Sequence
MVGMSDISGLAQSIQTSIDAAMKRVQEQAKQATDAKPSGNVQEYEQTVRKSALNAAPFAT
NVGTLIKDTSRLNVLSTLAANDPADFYKFNLATPGEVALGRVGDTGVRVQLMDKQGKIVA
DSNSEAGATYDAYKKFEAGTLSLDRGDYTLRVSRDKGVAAKEEKNYGLQLRMGDYSKDYD
TIAKQPAKGDNPLQQTPQLQRLTSLLTGGTTTSSGALGILTGGSGGYSGRGSLLNGLF
Download sequence
Identical sequences G8ANV6
gi|392378508|ref|YP_004985668.1| gi|392378508|ref|YP_004985668.1|NC_016594 WP_014198385.1.1190

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]