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Domain assignment for gi|20089546|ref|NP_615621.1| from Methanosarcina acetivorans C2A

Domain architecture


Domain assignment details

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Strong hits

Sequence:  gi|20089546|ref|NP_615621.1|
Domain Number 1 Region: 338-434
Classification Level Classification E-value
Superfamily alpha-helical ferredoxin 0.00000000000000523
Family Fumarate reductase/Succinate dehydogenase iron-sulfur protein, C-terminal domain 0.051
Further Details:      
 
Domain Number 2 Region: 291-357
Classification Level Classification E-value
Superfamily Nqo1 middle domain-like 0.00000000000602
Family Nqo1 middle domain-like 0.009
Further Details:      
 
Domain Number 3 Region: 80-295
Classification Level Classification E-value
Superfamily Nqo1 FMN-binding domain-like 0.000000112
Family Nqo1 FMN-binding domain-like 0.021
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Cellular Component IC (bits) H-Score
Biological Process IC (bits) H-Score
Molecular Function IC (bits) H-Score

Protein sequence

External link(s) gi|20089546|ref|NP_615621.1|
Sequence length 447
Comment Na+-transporting NADH:ubiquinone oxidoreductase, subunit 1 [Methanosarcina acetivorans C2A]
Sequence
MKRSLHSKEVANLSDVIKIDKLPEKAIIPMRQHDGIACAPLVKKGAEVIVGQKLGECEGS
DLAYVHSPFCGTVNSIELMPNPSGKRILSVVLTPSECAQTVDFVPEKDAPPSRLIEIIKE
AGIVEYYEKPTYLALKPGKRIDTLLMNATFPLITHAYLSSLDKVLEGFKLMLEASGISRG
VIVLRADDKESIKAFKNAKVDGKPLTVAPIVGMRHADYYLEDVEDQIIVVAAGKITYTPT
MMNLLSANVMGRKLPLGYEPPDVHVVVCGVKSAKAVYDAINEGKPYLESAVTVTGAVNNP
KTVIVKFGTPIKDVIEACGGYKGEPGKVIVNGSMGGVAVYTDEAPVVKNTVGIVVQTEAE
VLRDEATVCIHCARCVDVCPMNLLPGRIAAMADMGMFDRCREYFALNCIECGECAVVCPA
KRHLVQLIRYSKLQIMNQKNETVEATE
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Identical sequences Q8TSY4
WP_011020706.1.98848 gi|20089546|ref|NP_615621.1| 188937.MA0659

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