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Domain assignment for gi|20089929|ref|NP_616004.1| from Methanosarcina acetivorans C2A

Domain architecture


Domain assignment details

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Strong hits

Sequence:  gi|20089929|ref|NP_616004.1|
Domain Number 1 Region: 26-417
Classification Level Classification E-value
Superfamily Pectin lyase-like 1.4e-35
Family Pectate lyase-like 0.037
Further Details:      
 
Domain Number 2 Region: 503-591
Classification Level Classification E-value
Superfamily Cadherin-like 0.000000000000565
Family Cadherin 0.043
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Molecular Function IC (bits) H-Score
Cellular Component IC (bits) H-Score
Biological Process IC (bits) H-Score

Protein sequence

External link(s) gi|20089929|ref|NP_616004.1|
Sequence length 981
Comment hypothetical protein MA1059 [Methanosarcina acetivorans C2A]
Sequence
MNTMERKLLMLFLVALTLLINIQIVLCASPTAPIVYIDTDGSGDYNCDGKNDHIEINEAL
SFVNKNSDFTTVHLNGSNTYWINDTLYIGSNTILEGDSDAVIKLIDYANWNIEYKGFIEA
KQDLEKNITIRGFEIDGNCKNQYEKIGNSFYNMINLKKSYNVTVHDMYLHDGLGDGIKVF
HDYSREYETVPTNINVYNNTIFEIGHDAVWLKHSSNASIYNNNITIKADAAIRLTETMHI
KIYNNTITSNYKGYAGIELDKKMTDRLMDDIEIYNNLIYHTHAWAIWLVGYGKYDKDKAK
GVWIHHNVIYDTGTSSTLHEAGGIVVQGFNNTIIENNVIDGNRKYGVAYELYPAYGIPKD
NGFVTIVRNNIISNTIRNVADVGSGWGVKDCDPSNHTFILEYNCVYNSAAGNYVNVAPTT
DINVDPLYADISNRDYHLKSKAGRWSNAGWTTDNVSSPCIDAGHPLSDYSNEPEDNGDRI
NIGAYGNTKYASNSGDAPININHPPVMDPIPSATVEIGKTLNFEVNASDEDGDSLTYSVL
DIPEEATFDGNSRIFSWTPISGQEGSYTVIFEVSDGELKDSTTANITVVENDSNPDEDIK
IYDNRLREASPDTVIQNKPFIDVGGTDNVGRYRDVMWFNLSEYSDQKISKAIISLYWYYP
EESRPEDTVIEVYRPASWNPSYVSWNNRDNGVKWTNAGGDWYDKEGVSQGNTPYAKFTIK
GKELPDNRYYELDITDLVKEYVSGEYENTGFLIKARSESNNYIAFYSSDCGNESQEPKLK
ITKQVPAEPVNVAITGAKDNRLREASPDTVFQDKPFIDVGGTDDVGRYRDVMWFNLSEYS
DQEISKAIISLYWYYPEESRPEDTVIEVYRPASWNPSYVSWNNRDNGVKWTNAGGDWYDK
EGVSQGNTPYAKFTIKGKELPDNRYYELDITDLVKEYVSGEYENTGFLIKAKTESNNYIA
FYSNDWEIESQRPILNMRIVQ
Download sequence
Identical sequences Q8TRW0
188937.MA1059 gi|20089929|ref|NP_616004.1| WP_011021088.1.98848

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