SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for gi|20091496|ref|NP_617571.1| from Methanosarcina acetivorans C2A

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  gi|20091496|ref|NP_617571.1|
Domain Number 1 Region: 6-169
Classification Level Classification E-value
Superfamily Pectin lyase-like 5.69e-27
Family Pectin methylesterase 0.05
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Molecular Function IC (bits) H-Score
Biological Process IC (bits) H-Score
Cellular Component IC (bits) H-Score

Protein sequence

External link(s) gi|20091496|ref|NP_617571.1|
Sequence length 226
Comment hypothetical protein MA2675 [Methanosarcina acetivorans C2A]
Sequence
MIAIYSPASAREITVDDSNSDAAFISIQEAVNSSSSGDVILVSPGFYNESVDIGIQNVSV
LSKSENPEDTTVRAFNVSANGITVSGFSIHESLNLRGYMSPAGYNSCCPIENCTVKNNIL
RLGIYADECYNSTLGKNVVLNSGIGIHSFAVANFTISDNLIVKGDIDVYQGPDHCVLLNN
TLLNGSIGLTECGYHKSLVIIFQTIKKVLELASGNLIPMRLKIIRL
Download sequence
Identical sequences Q8TMI4
188937.MA2675 gi|20091496|ref|NP_617571.1|

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]