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Domain assignment for gi|20091736|ref|NP_617811.1| from Methanosarcina acetivorans C2A

Domain architecture


Domain assignment details

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Strong hits

Sequence:  gi|20091736|ref|NP_617811.1|
Domain Number 1 Region: 30-204
Classification Level Classification E-value
Superfamily Pectin lyase-like 1.04e-28
Family Pectin methylesterase 0.048
Further Details:      
 
Domain Number 2 Region: 235-317
Classification Level Classification E-value
Superfamily PKD domain 8.37e-25
Family PKD domain 0.00024
Further Details:      
 
Domain Number 3 Region: 323-405
Classification Level Classification E-value
Superfamily PKD domain 5.36e-19
Family PKD domain 0.00059
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Biological Process IC (bits) H-Score
Molecular Function IC (bits) H-Score
Cellular Component IC (bits) H-Score

Protein sequence

External link(s) gi|20091736|ref|NP_617811.1|
Sequence length 597
Comment cell surface protein [Methanosarcina acetivorans C2A]
Sequence
MAQTQTFRRTCFLLAIFILISVSGIGTASEFRVWPGQSIQDAVDSASPGDIILVESGEFN
ESIRVNKENLTIESASGNPDDIFIAGDTPISYVFEVVANDVKINFFSITDGRCGIFLNNV
ENCVINGNKISNQEAGIYLLNSRNNLLTNNMVYSNEDCGLKLLASSENIIYGNYFDNVEN
ARDNRFNVWNNSKGNYWSDYGGTDENGDGIGDTPYAINPEVGSMDYRPLIEYSQEAPILP
KALFTSDVTEGYAPLVVRFKDFSEDAASRLWDFGDGNFSSYPNPQHTYLNEGTYVVSLTV
SNENGSDSASVTVYVRDASELAGPMLPKAQFIYNTTSGHIPLVIKFVDISENADCVTWYF
GDGKTSCCPEPEHTFCCPGSYTVSLAAINENGTSSASIVVNVLPAESVESSEDTENSANT
GSGSDKNNACNIVNETDADASEKAGDPELITRSENTDSLGNSIIEYASDTTDKFADAENS
INAEATENSESDSNGGGEGTGTARIIHREELEAIKDSVISTASSNILKETERALENETLK
VQKNVEDFVDDSLPESVGDSLPEMEQRIAPWIPSFLGLAGVIFIVSVMKRGRRRRQK
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Identical sequences Q8TLV8
WP_011022864.1.98848 188937.MA2916 MvR215 gi|20091736|ref|NP_617811.1|

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