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Domain assignment for gi|20091797|ref|NP_617872.1| from Methanosarcina acetivorans C2A

Domain architecture


Domain assignment details

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Strong hits

Sequence:  gi|20091797|ref|NP_617872.1|
Domain Number 1 Region: 28-291
Classification Level Classification E-value
Superfamily Pectin lyase-like 5.03e-38
Family Pectin methylesterase 0.09
Further Details:      
 
Domain Number 2 Region: 270-472
Classification Level Classification E-value
Superfamily Pectin lyase-like 0.0000000000175
Family Pectin lyase 0.08
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Biological Process IC (bits) H-Score
Molecular Function IC (bits) H-Score
Cellular Component IC (bits) H-Score

Protein sequence

External link(s) gi|20091797|ref|NP_617872.1|
Sequence length 564
Comment cell surface protein [Methanosarcina acetivorans C2A]
Sequence
MNLLVYSLFFTSSIRRCYNMELKNLFTILLIIFSINCASAITITVDANIGNDSNFSSIQE
AINFAQENDSILIYKGNYSETLTIDKQLKIGSISRNPEDVIINSEVSSLPIVHVTSDNVE
ITDLTISGNSGENQVSGILLDGAGNSLVQNNIISNVQDGLVLNASSGCSIENNTLFANTL
HGIYLINSKDNDLTNNLIIGNKRGLYLNLSNQNTLANNNASNNENYGIALRKANANNLTN
NQFFTNKYGLCLIVSLENIIVDNIAGNNKQSGFLLWISESNNLKDNILIENGNSGVYLQA
SDTNTLIRNFFSNNSNAISMDYSSNNLVINNTFSSNKEYGIFYLHDSNKSNTIKENIFLN
NKKGDDNLPSSSIPIYIFILLAGAGLAYYLQKRSLLKKALIGLGILTIISLIAIVAWYFP
FESGFSGNNVEITDFSWYNSSKINETHTQVTLSMDINYRNKQAYDYSFAENSQTDVIPAR
VQILSREYKPDVDTEIPYSLIYEEDINLTYRKPFNYEATLDLENGMEHDVQTIIVFKREF
DYPIPHGEEIRWEQLGGWQQLIST
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Identical sequences Q8TLQ4
gi|20091797|ref|NP_617872.1| 188937.MA2979

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