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Domain assignment for gi|20093361|ref|NP_619436.1| from Methanosarcina acetivorans C2A

Domain architecture


Domain assignment details

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Strong hits

Sequence:  gi|20093361|ref|NP_619436.1|
Domain Number 1 Region: 17-307
Classification Level Classification E-value
Superfamily Pectin lyase-like 1.68e-55
Family Pectate transeliminase 0.053
Further Details:      
 
Domain Number 2 Region: 259-417
Classification Level Classification E-value
Superfamily Pectin lyase-like 4.82e-17
Family Pectate transeliminase 0.064
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Molecular Function IC (bits) H-Score
Biological Process IC (bits) H-Score
Cellular Component IC (bits) H-Score

Protein sequence

External link(s) gi|20093361|ref|NP_619436.1|
Sequence length 475
Comment cell surface protein [Methanosarcina acetivorans C2A]
Sequence
MDLNLYMKVKMYLFIGFVFLALAGPASADTITVNNGEEGDYKSIQKAINNANPGDTILVY
PGTYKENLVVDRELRIISKSGNPENTIVLAATQKEHVFKIASDNVTIKGFKIKDASGTSG
NYKYGIYLEETKNCTIDNNYISNNREGIFLIDSSNNTLINNKLPKNNDAGIILRSSDHNT
IMSNNLSGNIAGIVIIYSSSDNRVDGNTVFENTIGIEVQGNNNTIRNNTISNNDKCGIDI
ESSADNAISGNIVNSNKRNGIEIGFSKNNTLKNNTINFNGMDGVFLLYSNNNTLNGNNAS
NNANHGISLMDCDYNLLRNNLVNLNNANGIQLWNRGTEIDDDAIFEWGGSGDNILSNNTA
SNNTAYGIYIGISGDNNKLKNNSMGSNGKYGIFLAEASRNNELEGNRMDSNLLGDVLVSS
DEILIGSNELSTPEISSQEMEEDPGTRLRGVPFIGCFMTTAIVGIAAIIVKRKQE
Download sequence
Identical sequences Q8THE0
gi|20093361|ref|NP_619436.1| 188937.MA4577 MvR253

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