SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for ENSMUSP00000014686 from Mus musculus 63_37 (longest transcript per gene)

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  ENSMUSP00000014686
Domain Number 1 Region: 413-540
Classification Level Classification E-value
Superfamily C-type lectin-like 1.86e-39
Family C-type lectin domain 0.00014
Further Details:      
 
Weak hits

Sequence:  ENSMUSP00000014686
Domain Number - Region: 267-409
Classification Level Classification E-value
Superfamily Tropomyosin 0.000124
Family Tropomyosin 0.0032
Further Details:      
 
Domain Number - Region: 182-288
Classification Level Classification E-value
Superfamily Spectrin repeat 0.0475
Family Spectrin repeat 0.0094
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Molecular Function IC (bits) H-Score
Cellular Component IC (bits) H-Score
Biological Process IC (bits) H-Score

Protein sequence

External link(s) Protein: ENSMUSP00000014686   Gene: ENSMUSG00000014542   Transcript: ENSMUST00000014686
Sequence length 548
Comment pep:known chromosome:NCBIM37:6:83594536:83606181:-1 gene:ENSMUSG00000014542 transcript:ENSMUST00000014686
Sequence
MKEAELNRDMARYCTDNQCVSLQPQGLGPKSAALMAPRTLRHVQVILALMVVTVIFSLLA
LFVVASQPWRPEWNKEPPSLLLRGSNNSGHDNHSQFVRETEMQVAIQRLRDYEENSSSCH
KEVQILKYQMDNVSSLVQLLGSHLEDVNADILQTKDVLKESGALALETQALRSSLEVASA
DIHSLRGDLEKANAMTSQTRGLLKSSTENTSAELHVLGRGLEEAQSEIQALRGSLQSAND
LSSQTQGFLQHSMDNISAQIQTVRDGMERAGEKMNSLKKELETLTAQTQKANGHLEQTDA
QIQGLKAELKSTSSLNSRIEVVNGQMKDASRELQTLRRDLSDVSALKSNVQMLQSNLQRA
KTEMQSLKADLQATKALTAKIQGEQNRLGALQEAVAAQKQEQKTQNQVLQLIAQNWKYFN
GNFYYFSRDKKPWREAEKFCTSQGAHLASVTSQEEQAFLVQTTSSGDHWIGLTDQGTEGI
WRWVDGTPFNNAQSKGFWGKNQPDNWRHRNGEREDCVHVRQQWNDMACGSSYPWVCKKST
GWSAARVG
Download sequence
Identical sequences A0A0R4IZZ5
10090.ENSMUSP00000014686 ENSMUSP00000014686 ENSMUSP00000014686 NP_058031.2.92730 NYSGRC-LECT-ENSMUSP00000014686 ENSMUSP00000014686

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]