SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for ENSMUSP00000029440 from Mus musculus 63_37 (longest transcript per gene)

Domain architecture


Domain assignment details

(
show help)

No Significant Hits.

Weak hits

Sequence:  ENSMUSP00000029440
Domain Number - Region: 26-99
Classification Level Classification E-value
Superfamily Tropomyosin 0.0144
Family Tropomyosin 0.0033
Further Details:      
 
Domain Number - Region: 168-336
Classification Level Classification E-value
Superfamily Galactose oxidase, central domain 0.034
Family Galactose oxidase, central domain 0.05
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Molecular Function IC (bits) H-Score
Cellular Component IC (bits) H-Score
Biological Process IC (bits) H-Score

Protein sequence

External link(s) Protein: ENSMUSP00000029440   Gene: ENSMUSG00000027848   Transcript: ENSMUST00000029440
Sequence length 406
Comment pep:known chromosome:NCBIM37:3:103537635:103541924:-1 gene:ENSMUSG00000027848 transcript:ENSMUST00000029440
Sequence
MGPSAPLLLLFFLSWTGPLQGQQHHLVEYMERRLAALEERLAQCQDQSSRHAAELRDFKN
KMLPLLEVAEKERETLRTEADSISGRVDRLEREVDYLETQNPALPCVELDEKVTGGPGAK
GKGRRNEKYDMVTDCSYTVAQVRSMKILKRFGGSVGLWTKDPLGPAEKIYVLDGTQNDTA
FVFPRLRDFTLAMAARKASRIRVPFPWVGTGQLVYGGFLYYARRPPGGPGGGGELENTLQ
LIKFHLANRTVVDSSVFPAESLIPPYGLTADTYIDLAADEEGLWAVYATRDDDRHLCLAK
LDPQTLDTEQQWDTPCPRENAEAAFVICGTLYVVYNTRPASRARIQCSFDASGTLAPERA
ALSYFPRRYGAHASLRYNPRERQLYAWDDGYQIVYKLEMKKKEEEV
Download sequence
Identical sequences A0A0R4J086
10090.ENSMUSP00000029440 ENSMUSP00000029440 ENSMUSP00000029440 NP_598620.2.92730 ENSMUSP00000029440

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]