SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for ENSMUSP00000104534 from Mus musculus 63_37 (longest transcript per gene)

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  ENSMUSP00000104534
Domain Number 1 Region: 103-223
Classification Level Classification E-value
Superfamily PX domain 0.0000000000000172
Family PX domain 0.0047
Further Details:      
 
Domain Number 2 Region: 304-358
Classification Level Classification E-value
Superfamily SAM/Pointed domain 0.0000000255
Family SAM (sterile alpha motif) domain 0.0052
Further Details:      
 
Domain Number 3 Region: 902-932
Classification Level Classification E-value
Superfamily Retrovirus zinc finger-like domains 0.00000471
Family Retrovirus zinc finger-like domains 0.0038
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Biological Process IC (bits) H-Score
Molecular Function IC (bits) H-Score
Cellular Component IC (bits) H-Score

Protein sequence

External link(s) Protein: ENSMUSP00000104534   Gene: ENSMUSG00000061410   Transcript: ENSMUST00000108906
Sequence length 1021
Comment pep:known chromosome:NCBIM37:8:124127453:124175833:-1 gene:ENSMUSG00000061410 transcript:ENSMUST00000108906
Sequence
MASNHPAFSFHQKQVLRQELTQIQSSLNSGGGGGGGGGGGGKSAPGPSGALPTCSACHKM
APRTETPVSSISNSLENALHTSAHSTEESLPKRPLGKHGKVSVEKIDLKGLSHTKNDRSV
ECSFEVLWSDSSITSVTKSSSEVTEFISKLSQLCPEENLDKLIPCLAGPDSFYVERNHVD
LEAGLRFLASAPSHTLKHDHVRKFFSSSSPSQQLQSPSPGNPSLPKVGAVMGVSGRPVCG
VAGIPSSQSSAQHHLQHSASTSASLPHCSHTGGTGSALAYRTQVDNSPTILMPSSLQTPQ
PQEQNGILDWLRKLRLHKYYPVFKQLTMEKFLSLTEEDLNKFESLTMGAKKKLKTQLELE
KEKSERRCLNSSAPSLVTSSGVARVTPTSHVGPVQPGRSSSHASELRVEVEPPAHQLPRE
GSSSEYSSSSSSPMGVQVREESSDSAEESDRRVDIHVEGTEKEKPVMLLAHFPSSSARPT
AQVLPVQNETGSSPAAHHPLPPQLMPAASHLAPVRMLNSVHKSDRGGADVKLLSSSVHSL
LSLEERNKGPGPRSGTKVDKSFGGAVLDPLPSAAPHPPGQGLSGLVENNAVSPTVSFGPR
AKVVHAATLDRVLKTAQQPALTVESSSATTGTPSTVLHVARPPIKLLLASSVPADAAIAG
QTSCPNNGQISVPPAIMNPRTALYTANTKVAFSAVSSVPVGPLQGSFCANSNTASPSSHP
STSFASMASLPSCPAPSSSPALSSVPESSFYSGGAGSSSPGNIPASSQSHHHHHHHQQPP
APPQPAPPPPGCIVCTSCGCSGSCGSNGLTVSYANYFQHPFSGPSVLTFPFLPFSPMCGN
GYVSTQQYGGGSAFPVVHTPYNGSVTPDPVLGGQSTFAVPPMQNFMAGTAGVYQAQGLVG
STNGSSHKKSGNLSCYNCGATGHRAQDCKQPSMDFNRQGKQVRGSHVLLALWLVAPERRK
QETCFVLFFKMIFIHTVFFFFFFIYLFIIICTYTVAVFRCTRRGCQTSSRVVVSHHVVAG
I
Download sequence
Identical sequences ENSMUSP00000104534

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]