SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

  Home > Genomes > Mus musculus 63_37 (longest transcript per gene) > ENSMUSP00000102796

Domain assignment for ENSMUSP00000102796 from Mus musculus 63_37 (longest transcript per gene)

Domain architecture

Domain assignment details

(show help)
Strong hits

Sequence:  ENSMUSP00000102796
Domain Number 1 Region: 1268-1369
Classification Level Classification E-value
Superfamily Immunoglobulin 4.49e-19
Family I set domains 0.01
Further Details:      
 
Domain Number 2 Region: 1180-1255
Classification Level Classification E-value
Superfamily Immunoglobulin 2.22e-18
Family I set domains 0.022
Further Details:      
 
Domain Number 3 Region: 1397-1479
Classification Level Classification E-value
Superfamily Immunoglobulin 0.0000000000000618
Family I set domains 0.0087
Further Details:      
 
Domain Number 4 Region: 870-934
Classification Level Classification E-value
Superfamily Immunoglobulin 0.0000000000124
Family I set domains 0.056
Further Details:      
 
Domain Number 5 Region: 652-711
Classification Level Classification E-value
Superfamily TSP-1 type 1 repeat 0.0000000000785
Family TSP-1 type 1 repeat 0.0043
Further Details:      
 
Domain Number 6 Region: 766-832
Classification Level Classification E-value
Superfamily TSP-1 type 1 repeat 0.000000000275
Family TSP-1 type 1 repeat 0.0026
Further Details:      
 
Domain Number 7 Region: 1531-1598
Classification Level Classification E-value
Superfamily TSP-1 type 1 repeat 0.000000000353
Family TSP-1 type 1 repeat 0.003
Further Details:      
 
Domain Number 8 Region: 415-475
Classification Level Classification E-value
Superfamily TSP-1 type 1 repeat 0.00000000124
Family TSP-1 type 1 repeat 0.0042
Further Details:      
 
Domain Number 9 Region: 354-420
Classification Level Classification E-value
Superfamily TSP-1 type 1 repeat 0.00000000798
Family TSP-1 type 1 repeat 0.003
Further Details:      
 
Domain Number 10 Region: 512-566
Classification Level Classification E-value
Superfamily TSP-1 type 1 repeat 0.00000000837
Family TSP-1 type 1 repeat 0.0027
Further Details:      
 
Domain Number 11 Region: 33-81
Classification Level Classification E-value
Superfamily TSP-1 type 1 repeat 0.0000000196
Family TSP-1 type 1 repeat 0.0014
Further Details:      
 
Domain Number 12 Region: 593-649
Classification Level Classification E-value
Superfamily TSP-1 type 1 repeat 0.00000017
Family TSP-1 type 1 repeat 0.0068
Further Details:      
 
Domain Number 13 Region: 712-771
Classification Level Classification E-value
Superfamily TSP-1 type 1 repeat 0.000000209
Family TSP-1 type 1 repeat 0.0013
Further Details:      
 
Domain Number 14 Region: 1660-1716
Classification Level Classification E-value
Superfamily TSP-1 type 1 repeat 0.000000288
Family TSP-1 type 1 repeat 0.006
Further Details:      
 
Domain Number 15 Region: 296-359
Classification Level Classification E-value
Superfamily TSP-1 type 1 repeat 0.000000628
Family TSP-1 type 1 repeat 0.0059
Further Details:      
 
Weak hits

Sequence:  ENSMUSP00000102796
Domain Number - Region: 1598-1657
Classification Level Classification E-value
Superfamily TSP-1 type 1 repeat 0.000235
Family TSP-1 type 1 repeat 0.008
Further Details:      
 
Domain Number - Region: 1477-1536
Classification Level Classification E-value
Superfamily TSP-1 type 1 repeat 0.00103
Family TSP-1 type 1 repeat 0.0039
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Cellular Component IC (bits) H-Score
Biological Process IC (bits) H-Score
Molecular Function IC (bits) H-Score

Protein sequence

External link(s) Protein: ENSMUSP00000102796   Gene: ENSMUSG00000066113   Transcript: ENSMUST00000107178
Sequence length 1753
Comment pep:known chromosome:NCBIM37:4:85699819:86074286:1 gene:ENSMUSG00000066113 transcript:ENSMUST00000107178
Sequence 
MECCRRAAPGTPLLVLAFLLLSSRTARSEEDREGLWDAWGPWSECSRTCGGGASYSLRRC
LSSKSCEGRNIRYRTCSNVDCPPEAGDFRAQQCSAHNDVKYHGQLYEWLPVSNDPDNPCS
LKCQAKGTSLVVELAPKVLDGTRCYTESLDMCISGLCQIVGCDHQLGSTVKEDNCGVCNG
DGSTCRLVRGQYKSQLSASKSDDTVVAIPYGSRHIRLVLKGPDHLYLETKTLQGTKGENS
LSSTGIFLVDNSTVDFQKLPDKEILRMTGPLTADFIIKIHDLGPADSTVQFIFYQPIIHR
WRETDFFPCSATCGGGYQLTSAECYDLRSNRVVADQYCHYYPENVKPKPKLQECNLDPCP
ARWEATPWTACSSSCGGGIQSRAVSCVEEDIQGHVTSVEEWKCMYTPKMPVVQPCNIFDC
PKWLAQEWSPCTVTCGQGLRYRVVLCIDHRGMHTGGCSAKTKPHIKEECIIPTPCYKPRE
KLPIEAKLPWFKQAQELEEGAAVSEEPSFIPEAWSACTVTCGVGTQVRIIRCQVLLPFSQ
SVADLPADECEGPKPASQRACYAGPCNGETPEFNPDNGDGLLGGLQDLDELYDWEYEGFT
KCSESCGGGVQEAVVSCLNKQTRELADENLCVTSRRPPQLLKSCNLDPCPARWEIGKWSP
CSLTCGVGLQTRDVVCSHLLSREMNEVVVLADELCHHPKPSTVQACNRFNCPPAWYPAQW
QLCSRTCGGGIQKRDVLCKQRMADGSFLELPETFCSASKPTSHQGCKKDDCPSEWLLSEW
SECSVSCGEGTQTRSAICQRVLKTGVSTVVNSTLCPPLPFSSSIRPCMLATCARPGRPST
KHSPHIAAARNIYIQTRRQRKLHFVVGGFAYLLPKTTVVLRCPTRRFRKPLITWEKDGQH
SISSAHVTVAPFGYLKIHRLKPSDAGIYTCSAGPAREQFVIKLIGGNRKLVARPLSLWSE
EEEALQVRKTNPKEALQTHKHQNGIFSNGSKAEKRGLTADPGNRYDDIVSRLLEQGGWPG
ELLASWEVQDSAERNASSEEDPNAEQALLHLPFTMVAEQKRLDDILRNLSQQPEELRDLY
SKHLVAQLAQDIFRSHLENQDLLPKPSEQRFPPMAVPAHKHVSGFSSSLRSSSGEAGGGS
RRPHRKPAILRKISAAQQLSASEVVTHLGQTVALASGTLSVLLHCEAVGNPRPTIHWTRN
GEAVQFSDRILLQPDDSLQILAPVEADVGFYTCNATNALGYDSVSIAVTLAGKPLVKTSR
MTVLNTEKPTVTVDIGGTVRTVRGVNVTINCQVAGVPEAEVTWFRNKSKLGSSHHLHEGS
SHHLHEGSLLLTDVSFSDQGLYSCRAANLHGEQTESTQLLILDPPQVPTQLEDIRALLLA
TGPNLPSVLMSPLGTQLVLDPGNSALLGCPIKGHPTPNITWFQNGQPIATAPGLTHHIWG
AGQILRVANLSGGPQGEFSCLAQNEAGTLLQKASLVIQDYWWSVDRLATCSASCGNRGIH
QPRLRCLLNTTEVDPEHCTGKPRPAVQPVACNRRDCPSRWMVTSWSACTRSCGGGVQTRR
VTCQKLKASGISTPVSNDMCSQLAKRPVDTQACNQQLCVEWAFSSWGQCNGPCIGPRLAV
QHRQVFCQTRDGITLPSEQCSALPRPVSTQNCWSEACSVHWRVSLWTLCTATCGNYGFQS
RRVECVHVRTNKAVPEHLCSWGPRPANWQRCNVTPCENTECRDTTRYCEKVRQLKLCQLG
QFRSRCCGTCGKA
Download sequence
Identical sequences E9PWW5
ENSMUSP00000102796 ENSMUSP00000123343 NP_084243.3.92730 ENSMUSP00000102796

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]
Please cite: Gough, J., Karplus, K., Hughey, R. and Chothia, C. (2001). "Assignment of Homology to Genome Sequences using a Library of Hidden Markov Models that Represent all Proteins of Known Structure." J. Mol. Biol., 313(4), 903-919.

Please send feedback, comments or questions to superfamily@cs.bris.ac.uk or use the feedback form.

© Copyright 2013 The SUPERFAMILY authors and Julian Gough.