SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for ENSMUSP00000030765 from Mus musculus 76_38

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  ENSMUSP00000030765
Domain Number 1 Region: 303-673
Classification Level Classification E-value
Superfamily Pentein 1.43e-172
Family Peptidylarginine deiminase Pad4, catalytic C-terminal domain 0.000000000325
Further Details:      
 
Domain Number 2 Region: 124-302
Classification Level Classification E-value
Superfamily Peptidylarginine deiminase Pad4, middle domain 4.05e-71
Family Peptidylarginine deiminase Pad4, middle domain 0.0000164
Further Details:      
 
Domain Number 3 Region: 13-123
Classification Level Classification E-value
Superfamily Cupredoxins 1.7e-30
Family Peptidylarginine deiminase Pad4, N-terminal domain 0.0016
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Cellular Component IC (bits) H-Score
Biological Process IC (bits) H-Score
Molecular Function IC (bits) H-Score

Protein sequence

External link(s) Protein: ENSMUSP00000030765   Gene: ENSMUSG00000028927   Transcript: ENSMUST00000030765
Sequence length 673
Comment pep:known chromosome:GRCm38:4:140906344:140952586:1 gene:ENSMUSG00000028927 transcript:ENSMUST00000030765 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence
MQPPIRENMLRERTVRLQYGSRVEAVYVLGTQLWTDVYSAAPAGAKTFSLKHSEGVKVEV
VRDGEAEEVVTNGKQRWALSPSSTLRLSMAQASTEASSDKVTVNYYEEEGSAPIDQAGLF
LTAIEISLDVDADRDGEVEKNNPKKASWTWGPEGQGAILLVNCDRDTPWLPKEDCSDEKV
YSKQDLQDMSQMILRTKGPDRLPAGYEIVLYISMSDSDKVGVFYVENPFFGQRYIHILGR
QKLYHVVKYTGGSAELLFFVEGLCFPDESFSGLVSIHVSLLEYMAEGIPLTPIFTDTVMF
RIAPWIMTPNILPPVSVFVCCMKDNYLFLKEVKNLVEKTNCELKVCFQYMNRGDRWIQDE
IEFGYIEAPHKGFPVVLDSPRDGNLKDFPIKQLLGPDFGYVTREPLFETVTSLDSFGNLE
VSPPVTVNGKEYPLGRILIGSSFPLSGGRRMTKVVRDFLQAQQVQAPVELYSDWLTVGHV
DEFMTFIPIPGKKEFRLLMASTSACYQLFREKQKAGHGEAVMFKGLGGMSSKRITINKIL
SNESLTQENQYFQRCLDWNRDILKRELALTEKDIIDLPALFKMDENHQARAFFPNMVNMI
VLDKDLGIPKPFGPQVEEECCLETHVRGLLEPLGLACTFIDDISAYHKFLGEVHCGTNVR
RKPFTFKWWHMVP
Download sequence
Identical sequences Q08642
ENSMUSP00000030765 ENSMUSP00000030765 10090.ENSMUSP00000030765 ENSMUSP00000030765 NP_032838.2.92730

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]