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Domain assignment for ENSMUSP00000063276 from Mus musculus 76_38

Domain architecture


Domain assignment details

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Strong hits

Sequence:  ENSMUSP00000063276
Domain Number 1 Region: 50-256
Classification Level Classification E-value
Superfamily Nicotinic receptor ligand binding domain-like 4.05e-57
Family Nicotinic receptor ligand binding domain-like 0.0051
Further Details:      
 
Domain Number 2 Region: 258-455
Classification Level Classification E-value
Superfamily Neurotransmitter-gated ion-channel transmembrane pore 2.22e-54
Family Neurotransmitter-gated ion-channel transmembrane pore 0.0045
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Biological Process IC (bits) H-Score
Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score

Protein sequence

External link(s) Protein: ENSMUSP00000063276   Gene: ENSMUSG00000055078   Transcript: ENSMUST00000068456
Sequence length 463
Comment pep:known chromosome:GRCm38:7:57407690:57510009:-1 gene:ENSMUSG00000055078 transcript:ENSMUST00000068456 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence
MDNGMLSRFIMTQTLLVFCISMTLSSHFGFSQMPTSSVQDETNDNITIFTRILDGLLDGY
DNRLRPGLGERITQVRTDIYVTSFGPVSDTEMEYTIDVFFRQSWKDERLRFKGPMQRLPL
NNLLASKIWTPDTFFHNGKKSIAHNMTTPNKLLRLEDDGTLLYTMRLTISAECPMQLEDF
PMDAHACPLKFGSYAYPNSEVVYVWTNGSTKSVVVAEDGSRLNQYHLMGQTVGTENISTS
TGEYTIMTAHFHLKRKIGYFVIQTYLPCIMTVILSQVSFWLNRESVPARTVFGVTTVLTM
TTLSISARNSLPKVAYATAMDWFIAVCYAFVFSALIEFATVNYFTKRGWAWDGKKALEAA
KIKKKERELILNKSTNAFTTGKLTHPPNIPKEQPPAGTANAPTVSIKASEEKTAESKKTY
NSISKIDKMSRIVFPILFGTFNLVYWATYLNREPVIKGATSPK
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Identical sequences Q8BHJ7
ENSMUSP00000063276 ENSMUSP00000063276 ENSMUSP00000063276 10090.ENSMUSP00000063276 NP_795916.1.92730 XP_006540619.1.92730 XP_006540620.1.92730 XP_006540621.1.92730 XP_006540622.1.92730 XP_006540623.1.92730

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