SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for ENSMUSP00000112783 from Mus musculus 76_38

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  ENSMUSP00000112783
Domain Number 1 Region: 104-262
Classification Level Classification E-value
Superfamily C-type lectin-like 1.16e-18
Family C-type lectin domain 0.0061
Further Details:      
 
Domain Number 2 Region: 25-67
Classification Level Classification E-value
Superfamily LDL receptor-like module 0.0000000000445
Family LDL receptor-like module 0.0012
Further Details:      
 
Weak hits

Sequence:  ENSMUSP00000112783
Domain Number - Region: 261-326
Classification Level Classification E-value
Superfamily FnI-like domain 0.000921
Family VWC domain 0.02
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Biological Process IC (bits) H-Score
Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score

Protein sequence

External link(s) Protein: ENSMUSP00000112783   Gene: ENSMUSG00000003166   Transcript: ENSMUST00000117945
Sequence length 546
Comment pep:novel chromosome:GRCm38:16:17840355:17891660:-1 gene:ENSMUSG00000003166 transcript:ENSMUST00000117945 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence
MVPKADSGAFLLLFLLVLTVTEPLRPELRCNPGQFACHGGTIQCIPLPWQCDGWPTCEDK
SDEADCPEVTGEARPYGKETVDLRQGRARGGDPTHFHTVNVAQPVRFSRKCPSGWHHYEG
TASCYRVYLSGENYWDAAQTCQRVNGSLATFSTDQELRFVLAQEWDQPERSFGWKDQRKL
WVGYQYVITGRNHSLEGRWEVAFKGSPEVFLPPDPIFASAMSENDNVFCAQLQCFHFPTL
RHHDLHSWHAESCSEKSSFLCKRSQTCVDIKDNVVDEGFYFTPKGDDPCLSCTCHRGEPE
MCVAALCERPQGCQQYRKDPKECCKFMCLDPDGSSLFDSMASGMRLVVSCISSFLILSLL
LFMVHRLRQRRRERIESLIGANLHHFNLGRRIPGFDYGPDGFGTGLTPLHLSDDGEGGTF
HFHDPPPPYTAYKYPDMDQPDDPPPPYEASINPDSVFYDPADDDAFEPVEASLPAPRDGG
IEGALPRHLDQPLPPAETSLADLEDSTDSSSALLVPPDPAQSGSTPATEAPPGGGRLPRA
SLNTVV
Download sequence
Identical sequences A0A0R4J1M6
NP_001103220.1.92730 ENSMUSP00000112783

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]