SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for ENSMUSP00000116954 from Mus musculus 76_38

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  ENSMUSP00000116954
Domain Number 1 Region: 290-379,431-478,510-532
Classification Level Classification E-value
Superfamily P-loop containing nucleoside triphosphate hydrolases 0.00000000000021
Family Tandem AAA-ATPase domain 0.092
Further Details:      
 
Weak hits

Sequence:  ENSMUSP00000116954
Domain Number - Region: 97-155
Classification Level Classification E-value
Superfamily Nuclear receptor ligand-binding domain 0.00769
Family Nuclear receptor ligand-binding domain 0.012
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Molecular Function IC (bits) H-Score
Cellular Component IC (bits) H-Score
Biological Process IC (bits) H-Score

Protein sequence

External link(s) Protein: ENSMUSP00000116954   Gene: ENSMUSG00000020228   Transcript: ENSMUST00000154501
Sequence length 571
Comment pep:known chromosome:GRCm38:10:120084770:120112865:-1 gene:ENSMUSG00000020228 transcript:ENSMUST00000154501 gene_biotype:protein_coding transcript_biotype:nonsense_mediated_decay
Sequence
MARQDRLRELLGPLHPYKSDDEEEDCAQEEEGEQEEEFVDAEELCSGGIKAGSLPGRARV
SIPDEYTKEKCTVYGRFPLKGPWWRVKVQVLKPQRSRSYQVQGFPAYFLQVDMSPPDQKQ
ICSLFLKECNLASERIQEFLKWVEKVSSFENLHFENLWETLRLFYRETEKKDKKLSTPRE
QQGEEMRVEKSFAFISAMVALQFPKVMEFLPSLFPRHFKRLISSSSDWVLGCIEDVLGTQ
PWKLGFRRITYREMKLVRCEASWTAFSQCPSLLQLMTPLQKNALVIYSKLRQTCREDGHT
YIEVKDLTSGLSEHMSFEEACQSLAFLKDIDVVIYEKDYVFLSELYEAEQDIASSICELM
SRPPWHLKVDVKNVLASIRGAKPNDPGSAEAVEGSKPEEVGSEQGDSVLDAQDGDDHVRS
NGEHVANAEINDVPLDQDQVVALETICANAVTVLSGKGGCGKTTIVSRLFKHMEHLEETE
VQQACEDFEQDQEASEEWLDCPKQSPAGVDKAVEVLLTAPTGKAAGLLRQRTDLPAYTLC
QVMLDSCPVLNLVTCCRMSLRLLSQDSVPSN
Download sequence
Identical sequences D6RGT6
ENSMUSP00000116954

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]