SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for ENSMUSP00000127228 from Mus musculus 76_38

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  ENSMUSP00000127228
Domain Number 1 Region: 42-227
Classification Level Classification E-value
Superfamily L domain-like 5.22e-40
Family Ngr ectodomain-like 0.0051
Further Details:      
 
Domain Number 2 Region: 253-291,321-376
Classification Level Classification E-value
Superfamily Immunoglobulin 0.0000000000409
Family V set domains (antibody variable domain-like) 0.05
Further Details:      
 
Weak hits

Sequence:  ENSMUSP00000127228
Domain Number - Region: 530-569
Classification Level Classification E-value
Superfamily Fibronectin type III 0.00392
Family Fibronectin type III 0.0064
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Biological Process IC (bits) H-Score
Molecular Function IC (bits) H-Score
Cellular Component IC (bits) H-Score

Protein sequence

External link(s) Protein: ENSMUSP00000127228   Gene: ENSMUSG00000051243   Transcript: ENSMUST00000170421
Sequence length 745
Comment pep:known chromosome:GRCm38:9:58196298:58202534:-1 gene:ENSMUSG00000051243 transcript:ENSMUST00000170421 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence
MGPFGALCLAWALLGVVRACPEPCACVDKYAHQFADCAYKELREVPEGLPANVTTLSLSA
NKITVLRRGAFVNVTQVTSLWLAHSEVRTVESGALAVLSQLKNLDLSHNLISNFPWSDLR
NLSALQLLKMNHNRLGSLPRDALGALPDLRSLRINNNRLRTLEPGTFDALSALSHLQLYH
NPFHCSCGLVWLQAWAASTRVSLPEPDSIACASPPELQGVPVHRLPALPCAPPSVRLSAE
PPPEAPGTPLRAGLAFMLHCVAEGHPTPRLQWQLQIPGGTVVLVPPVLSKEEDGGDKVED
GEGDGDEDLPTQTEAPTPTPAPAWPAPPATPRFLALANGSLLVPLLSAKEAGIYTCRAHN
ELGTNSTSLRVTVAAAGPPKHAPGTGEEPDAQVPTSERKATTKGRSNSVLPFKPEGKTKG
QGLARVSVLGEIEAELEETDEGEQMEGQIPADPMGEKHCGHGDPSRYVSNHAFNQSSDLK
PHVFELGVIALDVAEREARVQLTPLAARWGPGPDGASGARRPGRRPLRLLYLCPAGGGTA
VQWSRVEEGVNAYWFRGLRPGTNYSVCLALAGEACHVQVVFSTKKELPSLLVIVTVSVFL
LVLATVPLLGAACCHLLAKHPGKPYRLILRPQAPDPMEKRIAADFDPRASYLESEKSYPA
RGEAGGEEPEEVPEEGLDEDVEQGDPSGDLQREESLAGCSLVESQSKANQEEFEAGSEYS
DRLPLGAEAVNIAQEINGNYRQTAG
Download sequence
Identical sequences Q5RKR3
NP_001155008.1.92730 NP_001155009.1.92730 NP_001155010.1.92730 NP_001155011.1.92730 NP_001155012.1.92730 NP_001155013.1.92730 NP_796167.2.92730 XP_006511292.1.92730 XP_006511293.1.92730 XP_006511294.1.92730 XP_006511295.1.92730 XP_006511296.1.92730 XP_006511297.1.92730 NYSGRC-IgSF-Q5RKR3 10090.ENSMUSP00000109781 ENSMUSP00000109781 ENSMUSP00000127228 ENSMUSP00000129328 ENSMUSP00000130322

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]