SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for ENSMUSP00000140104 from Mus musculus 76_38

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  ENSMUSP00000140104
Domain Number 1 Region: 1549-1723
Classification Level Classification E-value
Superfamily Concanavalin A-like lectins/glucanases 5.87e-32
Family Laminin G-like module 0.002
Further Details:      
 
Domain Number 2 Region: 1360-1541
Classification Level Classification E-value
Superfamily Concanavalin A-like lectins/glucanases 1.21e-30
Family Laminin G-like module 0.0028
Further Details:      
 
Domain Number 3 Region: 978-1150
Classification Level Classification E-value
Superfamily Concanavalin A-like lectins/glucanases 1.27e-20
Family Laminin G-like module 0.0049
Further Details:      
 
Domain Number 4 Region: 1149-1317
Classification Level Classification E-value
Superfamily Concanavalin A-like lectins/glucanases 2.67e-19
Family Laminin G-like module 0.0094
Further Details:      
 
Domain Number 5 Region: 777-969
Classification Level Classification E-value
Superfamily Concanavalin A-like lectins/glucanases 0.000000000000681
Family Laminin G-like module 0.022
Further Details:      
 
Domain Number 6 Region: 130-180
Classification Level Classification E-value
Superfamily EGF/Laminin 0.00000000218
Family Laminin-type module 0.042
Further Details:      
 
Domain Number 7 Region: 78-120
Classification Level Classification E-value
Superfamily EGF/Laminin 0.0000000586
Family Laminin-type module 0.0089
Further Details:      
 
Weak hits

Sequence:  ENSMUSP00000140104
Domain Number - Region: 229-336
Classification Level Classification E-value
Superfamily Tropomyosin 0.00523
Family Tropomyosin 0.0055
Further Details:      
 
Domain Number - Region: 534-660,694-748
Classification Level Classification E-value
Superfamily BAR/IMD domain-like 0.0146
Family BAR domain 0.068
Further Details:      
 
Domain Number - Region: 368-446
Classification Level Classification E-value
Superfamily Heat shock protein 70kD (HSP70), C-terminal subdomain 0.0863
Family Heat shock protein 70kD (HSP70), C-terminal subdomain 0.013
Further Details:      
 
Domain Number - Region: 411-520
Classification Level Classification E-value
Superfamily DNA repair protein MutS, domain III 0.0968
Family DNA repair protein MutS, domain III 0.032
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Biological Process IC (bits) H-Score
Molecular Function IC (bits) H-Score
Cellular Component IC (bits) H-Score

Protein sequence

External link(s) Protein: ENSMUSP00000140104   Gene: ENSMUSG00000024421   Transcript: ENSMUST00000188815
Sequence length 1724
Comment pep:known chromosome:GRCm38:18:12504199:12583013:1 gene:ENSMUSG00000024421 transcript:ENSMUST00000188815 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence
MLPAVRWSAWSTGWLWIFGAALGQCLGYGSEQQRVAFLQRPSQNHLQASYMELRPSQGCR
PGYYWDNKSLPVGRCVPCNCNGHSNRCQDGSGICINCQHNTAGEHCERCQAGHYGNAIHG
SCRVCPCPHTNSFATGCAVDGGAVRCACKPGYTGTQCERCAPGYFGNPQKFGGSCQPCNC
NSNGQLGPCDPLTGDCVNQEPKDGSPAEECDDCDSCVMTLLNDLASMGEELRLVKSKLQG
LSVSTGALEQIRHMETQAKDLRNQLLGFRSATSSHGSKMDDLEKELSHLNREFETLQEKA
QVNSRKAQTLYNNIDQTIQSAKELDMKIKNIVQNVHILLKQMARPGGEGTDLPVGDWSRE
LAEAQRMMRDLRSRDFKKHLQEAEAEKMEAQLLLHRIRTWLESHQVENNGLLKNIRDSLN
DYEDKLQDLRSILQEAAAQAKQATGINHENEGVLGAIQRQMKEMDSLKNDFTKYLATADS
SLLQTNNLLQQMDKSQKEYESLAAALNGARQELSDRVRELSRSGGKAPLVVEAEKHAQSL
QELAKQLEEIKRNTSGDELVRCAVDAATAYENILNAIRAAEDAASKATSASKSAFQTVIK
EDLPKRAKTLSSDSEELLNEAKMTQKRLQQVSPALNSLQQTLKTVSVQKDLLDANLTVAR
DDLHGIQRGDIDSVVIGAKSMVREANGITSEVLDGLNPIQTDLGRIKDSYESARREDFSK
ALVDANNSVKKLTRKLPDLFIKIESINQQLLPLGNISDNVDRIRELIQQARDAANKVAIP
MRFNGKSGVEVRLPNDLEDLKGYTSLSLFLQRPDLRENGGTEDMFVMYLGNKDASKDYIG
MAVVDGQLTCVYNLGDREAEVQIDQVLTESESQEAVMDRVKFQRIYQFAKLNYTKEATST
KPKAPGVYDMESASSNTLLNLDPENAVFYVGGYPPGFELPRRLRFPPYKGCIELDDLNEN
VLSLYNFKTTFNLNTTEVEPCRRRKEESDKNYFEGTGYARIPTQPNAPFPNFMQTIQTTV
DRGLLFFAENQDNFISLNIEDGNLMVKYKLNSEPPKEKGIRDTINNGRDHMILISIGKSQ
KRMLINMNKHSIIIEGEIFDFSTYYLGGIPIAIRERFNISTPAFQGCMKNLKKTSGVVRL
NDTVGVTKKCSEDWKLVRTASFSRGGQMSFTNLDVPSLDRFQLSFGFQTFQPSGTLLNHQ
TRTSSLLVTLEDGHIALSTRDSSSPIFKSPGTYMDGLLHHVSVISDTSGLRLLIDDQVLR
RNQRLASFSNAQQSLSMGGGYFEGCISNVFVQRMSQSPEVLDMASKSTKRDAFLGGCSLN
KPPFLMLFKSPKGFNKARSFNVNQLLQDAPQAARSIEAWQDGKSCLPPLNTKATHRALQF
GDSPTSHLLFKLPQELLKPRLQFSLDIQTTSSRGLVFHTGTRDSFVALYLSEGHVIFALG
AGGKKLRLRSKERYHDGKWHSVVFGLSGRKVHLVVDGLRAQEGSLPGNSTISPREQVYLG
LSPSRKSKSLPQHSFVGCLRNFQLDSKPLDSPSARSGVSPCLGGSLEKGIYFSQGGGHVV
LANSVSLEPALTLTLSIRPRSLTGVLIHIASQSGEHLSVYMEAGKVTTSMNSEAGGTVTS
ITPKRSLCDGQWHSVTVSIKQHTLHLELDTDNSYTAGQLSFPPNSTRGSLHIGGVPDKLK
MLTLPVWNSFFGCLKNIQVNHIPVPITEATDVQGSVSLNGCPDH
Download sequence
Identical sequences ENSMUSP00000140104 XP_006525753.1.92730

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]