SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for ENSMUSP00000121455 from Mus musculus 76_38

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  ENSMUSP00000121455
Domain Number 1 Region: 394-655
Classification Level Classification E-value
Superfamily Nuclear receptor ligand-binding domain 9.57e-56
Family Nuclear receptor ligand-binding domain 0.0000000203
Further Details:      
 
Domain Number 2 Region: 322-399
Classification Level Classification E-value
Superfamily Glucocorticoid receptor-like (DNA-binding domain) 6.62e-28
Family Nuclear receptor 0.0000143
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score
Biological Process IC (bits) H-Score

Protein sequence

External link(s) Protein: ENSMUSP00000121455   Gene: ENSMUSG00000028341   Transcript: ENSMUST00000153369
Sequence length 657
Comment pep:novel chromosome:GRCm38:4:48049114:48086447:1 gene:ENSMUSG00000028341 transcript:ENSMUST00000153369 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence
XRYPPGPQHLFSRQDLIPYTHDSISFGNVDMPCVQAQYSPSPPGSTYATQTYGSEYTTEI
MNPDYTKLTMDLGSTGIMATATTSLPSFSTFMEGYPSSCELKPSCLYQMPPSGPRPLIKM
EEGREHGYHHHHHHHHHHHHHQQQQPSIPPPSGPEDEVLPSTSMYFKQSPPSTPTTPGFP
PQAGALWDDELPSAPGCIAPGPLLDPQMKAVPPMAAAARFPIFFKPSPPHPPAPSPAGGH
HLGYDPTAAAALSLPLGAAAAAGSQAAALEGHPYGLPLAKRTATLTFPPLGLTASPTASS
LLGESPSLPSPPNRSSSSGEGTCAVCGDNAACQHYGVRTCEGCKGFFKRTVQKNAKYVCL
ANKNCPVDKRRRNRCQYCRFQKCLSVGMVKEVVRTDSLKGRRGRLPSKPKSPLQQEPSQP
SPPSPPICMMNALVRALTDATPRDLDYSRYCPTDQATAGTDAEHVQQFYNLLTASIDVSR
SWAEKIPGFTDLPKEDQTLLIESAFLELFVLRLSIRSNTAEDKFVFCNGLVLHRLQCLRG
FGEWLDSIKDFSLNLQSLNLDIQALACLSALSMITERHGLKEPKRVEELCTKITSSLKDH
QRKGQALEPSEPKVLRALVELRKICTQGLQRIFYLKLEDLVPPPSVIDKLFLDTLPF
Download sequence
Identical sequences F6R7A2
ENSMUSP00000121455 ENSMUSP00000121455 ENSMUSP00000121455 10090.ENSMUSP00000121455

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]