SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for ENSMEUP00000000478 from Macropus eugenii 76_1.0

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  ENSMEUP00000000478
Domain Number 1 Region: 121-320
Classification Level Classification E-value
Superfamily Nuclear receptor ligand-binding domain 5.53e-44
Family Nuclear receptor ligand-binding domain 0.00037
Further Details:      
 
Domain Number 2 Region: 73-147
Classification Level Classification E-value
Superfamily Glucocorticoid receptor-like (DNA-binding domain) 9.03e-25
Family Nuclear receptor 0.0000919
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Biological Process IC (bits) H-Score
Molecular Function IC (bits) H-Score
Cellular Component IC (bits) H-Score

Protein sequence

External link(s) Protein: ENSMEUP00000000478   Gene: ENSMEUG00000000528   Transcript: ENSMEUT00000000522
Sequence length 410
Comment pep:known_by_projection genescaffold:Meug_1.0:GeneScaffold_9035:234:2863:1 gene:ENSMEUG00000000528 transcript:ENSMEUT00000000522 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence
MAMVVGAWRDPQDDVPGNQGTQPSQAPPVQGPPAGAPHTPQTPGQGGPPSTPVQTNQPSQ
QSQAGDKQQQQQHIECVVCGDKSSGKHYGQFTCEGCKSFFKRSVRRNLSYTCRANRNCPI
DQHHRNQCQYCRLKKCLKVGMRREAVQRGRMPPTQPTHGQFALTNGDPLNCHSYLSGYIS
LLLRAEPYPTSRFGSQCMQPNNIMGIENICELAARMLFSAVEWARNIPFFPDLQITDQVA
LLRLTWSELFVLNAAQCSMPLHVAPLLAAAGLHASPMSADRVVAFMDHIRIFQEQVEKLK
ALHVDSAEYSCLKAIVLFTSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXMLLSGSSFNWPYMAIQ
Download sequence
Identical sequences ENSMEUP00000000478 ENSMEUP00000000478

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]