SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for ENSMEUP00000000880 from Macropus eugenii 76_1.0

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  ENSMEUP00000000880
Domain Number 1 Region: 6-78
Classification Level Classification E-value
Superfamily HLH, helix-loop-helix DNA-binding domain 0.00000000000196
Family HLH, helix-loop-helix DNA-binding domain 0.003
Further Details:      
 
Domain Number 2 Region: 93-159
Classification Level Classification E-value
Superfamily PYP-like sensor domain (PAS domain) 0.00000000275
Family Heme-binding PAS domain 0.069
Further Details:      
 
Domain Number 3 Region: 248-302
Classification Level Classification E-value
Superfamily PYP-like sensor domain (PAS domain) 0.0000000838
Family Hypoxia-inducible factor Hif2a, C-terminal domain 0.0025
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Cellular Component IC (bits) H-Score
Biological Process IC (bits) H-Score
Molecular Function IC (bits) H-Score

Protein sequence

External link(s) Protein: ENSMEUP00000000880   Gene: ENSMEUG00000000949   Transcript: ENSMEUT00000000957
Sequence length 823
Comment pep:known_by_projection genescaffold:Meug_1.0:GeneScaffold_7884:2204:77098:1 gene:ENSMEUG00000000949 transcript:ENSMEUT00000000957 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence
MDEDEKDRAKRASRNKSEKKRRDQFNVLIKELSSMLPGNTRKLDKTTVLEKVIGFLQKHN
EVSAQTELCDIQQDWKPSFLSNEEFTQLMLEALDGFIIAVTTDGNIIYVSDSITPLLGHL
PSDVMDQNLLNFLPEQEHSEVYKILSSHMLVTDSSSPEYLKSDNDLEFYCHLLRGSLNPK
EFPTYEYIKFVGNFRSYNNVPSPSCNGFDNTVTRAYRSPLGKQICFIATVRLATPQFLKE
MCIVEEPLEEFTSRHSLEWKFLFLDHRAPPIIGYLPFEVLGTSGYDYYHIDDLELLARCH
EHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXYADVRVER
RQELALEDSASEVVDSSTLKDKGASLDPQQHFSALEVGASVLNTSQSPSASSRSSHKSSH
TPMSETASTPTKLIRESSTPSLSRTSSLPQELPMQGLSQPATIPASLPSQSSCDLLTQHL
LPQAVLQSPATPMTQFSAQFSMFQTIKDQLEQRTRILQANIRWQQEELHKIQEQLCMVQD
SNLQMFLQQSAVSLSFSSLQRPEPQQQQQLQQRSGVVSQPQLVPSPQLPGQIATSQIANQ
QLLRESSVIASQGQKPMRSTQVMQGNGHSVSSLTSQFSSTALLPQALSLTTPGSITQDTG
QCHPSPDFSHDRQLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXYPQSPSGFPSLEVQ
TSSSSTSTPILLMGQAVLHPGFSTTQTSPLQPLQPQQPPHYLQVQTPTSLHNEQQDSLLL
PTYSQQQGTMGYHPTPPQPPPPPHPSRRPSSLSESSSLQQPPR
Download sequence
Identical sequences ENSMEUP00000000880 ENSMEUP00000000880

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]