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  Home > Genomes > Macropus eugenii 76_1.0 > ENSMEUP00000004492

Domain assignment for ENSMEUP00000004492 from Macropus eugenii 76_1.0

Domain architecture

Domain assignment details

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Strong hits

Sequence:  ENSMEUP00000004492
Domain Number 1 Region: 1370-1627
Classification Level Classification E-value
Superfamily YWTD domain 4.71e-56
Family YWTD domain 0.0000033
Further Details:      
 
Domain Number 2 Region: 759-956
Classification Level Classification E-value
Superfamily YWTD domain 1.31e-40
Family YWTD domain 0.0000101
Further Details:      
 
Domain Number 3 Region: 1093-1137,1181-1318
Classification Level Classification E-value
Superfamily YWTD domain 5.62e-34
Family YWTD domain 0.0000479
Further Details:      
 
Domain Number 4 Region: 457-582
Classification Level Classification E-value
Superfamily YWTD domain 6.8e-22
Family YWTD domain 0.0000674
Further Details:      
 
Domain Number 5 Region: 280-320
Classification Level Classification E-value
Superfamily LDL receptor-like module 0.0000000000288
Family LDL receptor-like module 0.00064
Further Details:      
 
Domain Number 6 Region: 370-449,1315-1365
Classification Level Classification E-value
Superfamily Growth factor receptor domain 0.000000000188
Family Growth factor receptor domain 0.016
Further Details:      
 
Domain Number 7 Region: 244-282
Classification Level Classification E-value
Superfamily LDL receptor-like module 0.000000000209
Family LDL receptor-like module 0.00082
Further Details:      
 
Domain Number 8 Region: 163-200
Classification Level Classification E-value
Superfamily LDL receptor-like module 0.000000000249
Family LDL receptor-like module 0.00064
Further Details:      
 
Domain Number 9 Region: 325-361
Classification Level Classification E-value
Superfamily LDL receptor-like module 0.000000000419
Family LDL receptor-like module 0.001
Further Details:      
 
Domain Number 10 Region: 84-122
Classification Level Classification E-value
Superfamily LDL receptor-like module 0.000000000812
Family LDL receptor-like module 0.00078
Further Details:      
 
Domain Number 11 Region: 203-241
Classification Level Classification E-value
Superfamily LDL receptor-like module 0.00000000432
Family LDL receptor-like module 0.0011
Further Details:      
 
Domain Number 12 Region: 656-713
Classification Level Classification E-value
Superfamily YWTD domain 0.0000000275
Family YWTD domain 0.0014
Further Details:      
 
Domain Number 13 Region: 42-84
Classification Level Classification E-value
Superfamily LDL receptor-like module 0.00000157
Family LDL receptor-like module 0.001
Further Details:      
 
Domain Number 14 Region: 715-753
Classification Level Classification E-value
Superfamily EGF/Laminin 0.00000176
Family EGF-type module 0.0083
Further Details:      
 
Weak hits

Sequence:  ENSMEUP00000004492
Domain Number - Region: 1627-1664
Classification Level Classification E-value
Superfamily EGF/Laminin 0.00123
Family EGF-type module 0.01
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Molecular Function IC (bits) H-Score
Cellular Component IC (bits) H-Score
Biological Process IC (bits) H-Score

Protein sequence

External link(s) Protein: ENSMEUP00000004492   Gene: ENSMEUG00000004865   Transcript: ENSMEUT00000004929
Sequence length 1924
Comment pep:known_by_projection genescaffold:Meug_1.0:GeneScaffold_5793:3729:59781:-1 gene:ENSMEUG00000004865 transcript:ENSMEUT00000004929 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence 
MRRPGGSLLLLVGALLCAHGSGLGLGLSLGRVAGLASSPECACGRSHFTCAVSALGECTC
IPAQWQCDGDNDCGDHSDEDGCMLPTCSPLDFHCDNGKCIRRSWVCDGDNDCEDDSDEQD
CXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXMRKCSDKEFRCSDGSCIAEH
WYCDGDSDCKDGSDEESCPSAVPAPPCSLEEFQCAYGRCILDIYHCDGDDDCGDWSDESD
CSSHQPCRSGEFMCDSGLCINAGWRCDGDADCDDQSDERNCTTSMCTAEQFRCKSGRCVR
LSWRCDGEDDCSDNSDEENCENTGSPQCASDQFLCGNGRCIGQRKLCNGANDCGDSSDES
PQQNCRPRTGQENCNVNNGGCAQKCQMVRGAVQCTCHTGYRLMEDGRSCQDVNECEEEGY
CSQGCTNSDGAFQCWCEAGYELRPDRRSCKALGPEPVLLFANRIDIRQVLPHRSEYTLLL
NNLENAIALDFHHRRELVFWSDVTLDRILRANLNGSNVEEVVSTGLESPGGLAVDWLHDK
LYWTDSGTSRIEVANLDGAHRKVLLWQNLEKPRAIALHPMEGXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLPHPF
AITVFEDSLYWTDWHTKSINSANKFTGKNQEIIRNKLHFPMDIHTLHPQRQPAGRNRCGD
NNGGCTHLCLPSGQNYTCACPTGFRKTSSHTCAQSLDKFLLFARRMDIRRISFDTEDLSD
DVIPLADVRSAVALDWDSRDDYVYWTDVSTDTISRAKWDGTGQEVVVDTSLESPAGLAID
WVTNKLYWTDAGTDRIEVANTDGTMRTVLIWENLDRPRDIVVPRGGFMYWTDWGASPKIE
RAGMDASGRQVIISSNLTWPNGLAIDYGSQRLYWADAGMKTIEFAGLDGSKRKXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXMRSFLIFARRIDIRMVSLD
IPYFADVVVPVNITMKNTIAIGVDPQEGKVYWSDSTLRRISRANLDGSQHEDIITTXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRAIVLYHEMGSMYWTD
WGENAKLERAGMDGSDRTVLISNNLGWPNGLTVDKAGSQLLWADAHTERIEAADLNGANR
RTLVSPVQHPYGLTLLDSYIYWTDWQTRSIHRADKGTGSNVILVRANLPGLMDIQAVDRQ
QPLGSNKCGPKNGGCSHLCLPRPSGFSCACPTGIQLKGDGKTCDPSPETYLLFSSRGSIR
RISLDTSDHTDVHVPVPELNNVISLDYDSVDGKVYYTDVFLDVIRRADLNGSNMETVIGR
GLKTTDGLAVDWVARNLYWTDTGRNTIEASRLDGSCRKVLINNSLDEPRAIAAFPRKGYL
FWTDWGHLAKIERSNLDGSERKLLINTDLGWPNGLTLDYDTRRIYWVDAHLDRIESADLN
GKLRQVLVSHVSHPFALTQQDRWIYWTDWQTKSIQRVDKYSGRNKETVLANVEGLMDIIV
VSPQRQTGTNACGVNNGGCTHLCFARALDFVCACPDEPDDRPCSLVPGLVPPAPKSTGTS
EMSPAPPNTPPTTSRSSTARTRTSLEESEGSCSEKDGHQGLCAHSNEAVPAAPGEGLHVS
YMVGGLLSILLILLLIAALMLYRHKKFKFTDPGLGNLTYSNPSYRTSTQEVKIETIPKPA
MYNQLCYKKEAGPEHSYTKEKTKVVEGICLLSGGGDDAEWDDLKQLRGSRGGLLLREHVC
MKTDTVSIQASSDSLDDTETEQLLQEEQSECSSVHTAAATPERRGSLPDTGWDHERKLST
ESQV
Download sequence
Identical sequences ENSMEUP00000004492 ENSMEUP00000004492

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Please cite: Gough, J., Karplus, K., Hughey, R. and Chothia, C. (2001). "Assignment of Homology to Genome Sequences using a Library of Hidden Markov Models that Represent all Proteins of Known Structure." J. Mol. Biol., 313(4), 903-919.

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© Copyright 2013 The SUPERFAMILY authors and Julian Gough.