SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for ENSMEUP00000011557 from Macropus eugenii 76_1.0

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  ENSMEUP00000011557
Domain Number 1 Region: 259-370
Classification Level Classification E-value
Superfamily Spermadhesin, CUB domain 3.14e-26
Family Spermadhesin, CUB domain 0.0015
Further Details:      
 
Domain Number 2 Region: 91-157
Classification Level Classification E-value
Superfamily Spermadhesin, CUB domain 0.000000000000103
Family Spermadhesin, CUB domain 0.0029
Further Details:      
 
Domain Number 3 Region: 450-488
Classification Level Classification E-value
Superfamily LDL receptor-like module 0.000000000017
Family LDL receptor-like module 0.001
Further Details:      
 
Domain Number 4 Region: 164-200
Classification Level Classification E-value
Superfamily LDL receptor-like module 0.00000000196
Family LDL receptor-like module 0.0011
Further Details:      
 
Domain Number 5 Region: 411-449
Classification Level Classification E-value
Superfamily LDL receptor-like module 0.000000128
Family LDL receptor-like module 0.0021
Further Details:      
 
Domain Number 6 Region: 212-254
Classification Level Classification E-value
Superfamily LDL receptor-like module 0.000000236
Family LDL receptor-like module 0.0023
Further Details:      
 
Domain Number 7 Region: 374-411
Classification Level Classification E-value
Superfamily LDL receptor-like module 0.000000733
Family LDL receptor-like module 0.0025
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Biological Process IC (bits) H-Score
Molecular Function IC (bits) H-Score
Cellular Component IC (bits) H-Score

Protein sequence

External link(s) Protein: ENSMEUP00000011557   Gene: ENSMEUG00000012672   Transcript: ENSMEUT00000012710
Sequence length 855
Comment pep:known_by_projection genescaffold:Meug_1.0:GeneScaffold_5691:4121:39991:-1 gene:ENSMEUG00000012672 transcript:ENSMEUT00000012710 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence
MARLGSTKEPPGWRSVRLLFFLVSVGGNGALAEHSENVHISGVSTXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFQDFDIQGSRRCNLDWLTIETFKNVESYR
ACGSTIPPPYISSQDHIWIKFHSDDSISRKGFRLAYFSGKSDEPNCACDQFRCGNGKCIP
ETWKCNNMDECGDNSDEEICAKEADPPTASSFQPCAYNQFQCLSRFTKVYTCLPESLKCD
GNIDCLDLGDEIDCDVQTCGQWLKYFYGTFNSPNYPDFYPPGSNCTWLIDTGDHRKVILR
FTDFKLDGTGYGDYVKIYDGLEENPHKLLRVLTAFDSHAPLTVVSSSGQIRVHFCADKVN
AARGFNATYQVDGFCLPWEIPCGGNWGCYTEQQRCDGYWHCPNGRDEINCTMCQKEEFPC
SRNGVCYPRSDRCNYQNHCPNGSDEKNCFFCQPGNFHCKNNRCVFESWVCDSQDDCGDGS
DEENCPVIVPTRVITAAVISLICGLLLVIALGCTCKLYSRMFERXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXASVLENLRLAVRSQLGFTSIRLPIAGRSSNI
WNRIFNFARSRHSGSLALVSADGDDVPNQNSSIEPERNTAHRNLFSVSDDTDTENXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXATHHGVRPCNRDGPCERCGIVHTAQIPDSCLEP
VLKSETSDDEALLLC
Download sequence
Identical sequences ENSMEUP00000011557 ENSMEUP00000011557

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]