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  Home > Genomes > Macropus eugenii 76_1.0 > ENSMEUP00000013576

Domain assignment for ENSMEUP00000013576 from Macropus eugenii 76_1.0

Domain architecture

Domain assignment details

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Strong hits

Sequence:  ENSMEUP00000013576
Domain Number 1 Region: 299-341
Classification Level Classification E-value
Superfamily LDL receptor-like module 0.000000000034
Family LDL receptor-like module 0.001
Further Details:      
 
Domain Number 2 Region: 158-221
Classification Level Classification E-value
Superfamily Serine protease inhibitors 0.000000000105
Family ATI-like 0.043
Further Details:      
 
Domain Number 3 Region: 760-818
Classification Level Classification E-value
Superfamily Serine protease inhibitors 0.000000000687
Family BSTI 0.048
Further Details:      
 
Domain Number 4 Region: 643-692
Classification Level Classification E-value
Superfamily TSP-1 type 1 repeat 0.00000000105
Family TSP-1 type 1 repeat 0.00075
Further Details:      
 
Domain Number 5 Region: 451-488
Classification Level Classification E-value
Superfamily LDL receptor-like module 0.00000000262
Family LDL receptor-like module 0.0012
Further Details:      
 
Domain Number 6 Region: 340-375
Classification Level Classification E-value
Superfamily LDL receptor-like module 0.00000000327
Family LDL receptor-like module 0.0013
Further Details:      
 
Domain Number 7 Region: 491-531
Classification Level Classification E-value
Superfamily LDL receptor-like module 0.0000000106
Family LDL receptor-like module 0.0017
Further Details:      
 
Domain Number 8 Region: 548-585
Classification Level Classification E-value
Superfamily LDL receptor-like module 0.0000000419
Family LDL receptor-like module 0.0028
Further Details:      
 
Domain Number 9 Region: 379-417
Classification Level Classification E-value
Superfamily LDL receptor-like module 0.0000000511
Family LDL receptor-like module 0.002
Further Details:      
 
Domain Number 10 Region: 699-751
Classification Level Classification E-value
Superfamily TSP-1 type 1 repeat 0.000000314
Family TSP-1 type 1 repeat 0.00077
Further Details:      
 
Domain Number 11 Region: 855-913
Classification Level Classification E-value
Superfamily TSP-1 type 1 repeat 0.000000641
Family TSP-1 type 1 repeat 0.0011
Further Details:      
 
Weak hits

Sequence:  ENSMEUP00000013576
Domain Number - Region: 262-287
Classification Level Classification E-value
Superfamily LDL receptor-like module 0.00109
Family LDL receptor-like module 0.0044
Further Details:      
 
Domain Number - Region: 911-974
Classification Level Classification E-value
Superfamily FnI-like domain 0.00115
Family Fibronectin type I module 0.043
Further Details:      
 
Domain Number - Region: 1008-1078
Classification Level Classification E-value
Superfamily Galactose-binding domain-like 0.00151
Family Discoidin domain (FA58C, coagulation factor 5/8 C-terminal domain) 0.014
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Biological Process IC (bits) H-Score
Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score

Protein sequence

External link(s) Protein: ENSMEUP00000013576   Gene: ENSMEUG00000014846   Transcript: ENSMEUT00000014919
Sequence length 1078
Comment pep:novel genescaffold:Meug_1.0:GeneScaffold_9548:2415:15616:1 gene:ENSMEUG00000014846 transcript:ENSMEUT00000014919 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence 
RLHWSFLISLPPGTRVMILLVPQFRGRVAGLCGNFDGDAANDLQSRQGVLEPTAELAAHS
WRLSLLCPEPSLGDIPHPCAVNAHRVGWARARCGVLLQSLFAPCHVEVPPQQYYEWCVYD
ACGCDSGGDCECLCSALATYAEECAWHGHRVHWRSQDLCPIQCEGGQVYEACGPVCPATC
QNPGPEPAWHCQAVPCVEGCFCPEGTLLHGGVCLEPAACPCEWRGSFLPLGTMLQRDCGN
CTCQAGEWNCGGSGSQCGEMMLECAEGEVPCRDNGYCVPQGWLCDHXXXXXXXXXXXXCA
PPGCEEGQFSCGKGRCLPMSLHCDGRDDCGDGADEHGCPCPKEFLPCADGQCLPLAQLCD
GHPDCPDGADEESCLGWENCGPGEVPCLDGTCVGTSQLCDGAWNCVDGADEGPRYCPSPL
LPTPPADTPTGPSMDNLESRPTSLIRGSSPELPCGHYEFSCGSGECIPRGWHCDYEEDCK
NGADELDCGQLCPPHHMPCLSLHCIPYLQLCDGTAQCPDGSDESLDACGELSPSNPQTLV
SIGSTQLPPCPGLFPCGSAPRLCLRLTRLCDGIPDCPEGEDELNCERLPFPTTPNKTGVP
CPEYSCPDGRCISFQQVRVRYKGVTLVILPSLTHVPSXEEQGCATWGPWAPWGLCSQTCG
AGVQARSRLCSPPSLPVLQHCLGLEHQTRACFTVACPEDGVWSDWSPWSECLEPCSGVVT
RHRVCHPPQNGGRTCATWPAGPHSTLQTKPCSQDGCPNVTSCPGELVPKPCAPCPLTCAD
ISSQIKCLPDRPCSPGCWCPDGWVLGFDGQCVRPRQCPCLVEGTRYWPGQRVKINCRLCT
CQDGRLRRCQPNPDCAVNCGWSSWSPWAECLGPCGSQSIQWSFRSPNNPTHMGRGYQCRG
IYRKARRCQTEPCEECEHQGSTHRVGERWRWGRCQVCHCLLNHTVQCSPYCSLGACPQGW
MLVEGKEESCCHCISVGENRTAAPTTTIVPSLTRTRSTYPLPAPGDPCYSPLGLSRLPSS
SLRASSEHPEHPAWAGRLGSLVLGLELQGWSPREDTYAELHIQPPFLQMDLLRPRNLT
Download sequence
Identical sequences ENSMEUP00000013576 ENSMEUP00000013576

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Please cite: Gough, J., Karplus, K., Hughey, R. and Chothia, C. (2001). "Assignment of Homology to Genome Sequences using a Library of Hidden Markov Models that Represent all Proteins of Known Structure." J. Mol. Biol., 313(4), 903-919.

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© Copyright 2013 The SUPERFAMILY authors and Julian Gough.