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Domain assignment for ENSMEUP00000011228 from Macropus eugenii 69_1.0

Domain architecture


Domain assignment details

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Strong hits

Sequence:  ENSMEUP00000011228
Domain Number 1 Region: 28-119
Classification Level Classification E-value
Superfamily Retrovirus capsid dimerization domain-like 1.42e-38
Family SCAN domain 0.0000726
Further Details:      
 
Domain Number 2 Region: 526-583
Classification Level Classification E-value
Superfamily beta-beta-alpha zinc fingers 2.38e-25
Family Classic zinc finger, C2H2 0.0059
Further Details:      
 
Domain Number 3 Region: 582-639
Classification Level Classification E-value
Superfamily beta-beta-alpha zinc fingers 1.5e-23
Family Classic zinc finger, C2H2 0.0058
Further Details:      
 
Domain Number 4 Region: 624-676
Classification Level Classification E-value
Superfamily beta-beta-alpha zinc fingers 5e-20
Family Classic zinc finger, C2H2 0.0057
Further Details:      
 
Domain Number 5 Region: 207-253
Classification Level Classification E-value
Superfamily KRAB domain (Kruppel-associated box) 8.24e-18
Family KRAB domain (Kruppel-associated box) 0.0016
Further Details:      
 
Weak hits

Sequence:  ENSMEUP00000011228
Domain Number - Region: 485-527
Classification Level Classification E-value
Superfamily beta-beta-alpha zinc fingers 0.00208
Family Classic zinc finger, C2H2 0.016
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Cellular Component IC (bits) H-Score
Biological Process IC (bits) H-Score
Molecular Function IC (bits) H-Score

Protein sequence

External link(s) Protein: ENSMEUP00000011228   Gene: ENSMEUG00000012317   Transcript: ENSMEUT00000012351
Sequence length 682
Comment pep:novel genescaffold:Meug_1.0:GeneScaffold_5122:7555:58223:-1 gene:ENSMEUG00000012317 transcript:ENSMEUT00000012351 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence
TMAAASGHQVQAPQKNSTQGQKAALQGNSDSETFRQHFRQFCYQEVAGPHEAFSTLWELC
CRWLRPKTNSKEQILEMLVLEQFLTILPGEIQVQVREHHPENGEEAVALVEDLQKETERP
EQQXXXXXXXXXXXXEKIVPVGTAQESMSYQIKQEENQQEEDPSKDASWSPHQGPQEQSD
SRLASQISLPRERRKRKQEMEAVILTTGFQEPVTCEDVTMSFSQEEWRCLNSSQRVLYRG
IMQENYRNVDSVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRLREQG
FLRTLEQCRYRFKNLQTSYQKAKTGRAPESCAFYGEMATLLSTHTLPVLTRETWDPSQEG
SNIDTEEPENREHEEGTEDCDTDGMINQELTHRQDARNPRFSSCWGLEIKNEIKKEDLKW
EYSEEEQSSRTIPGRFDRQIFQYPILKEACETVSKLRKQLINFPRERQGKPAFQERDLMK
KLGQQKLSVGEKHYKQLACGNSFSQNSHKSTPELEKTTKCHECGKSFSRGSYLVRHQRIH
TGEKPHKCNECGKSFSERSNLTAHLRTHTGERPYKCGECGKSFNQSSSLIVHQRTHTGEK
PYQCTECGKRFNNSSQFSAHRRAHTGESPYKCRECGKSFNNSSHFNAHQRTHTGEKPYEC
PQCGKSFSKSSALTRHQGVHMR
Download sequence
Identical sequences ENSMEUP00000011228 ENSMEUP00000011228

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