SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for ENSMEUP00000013962 from Macropus eugenii 69_1.0

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  ENSMEUP00000013962
Domain Number 1 Region: 286-343
Classification Level Classification E-value
Superfamily beta-beta-alpha zinc fingers 1.42e-24
Family Classic zinc finger, C2H2 0.004
Further Details:      
 
Domain Number 2 Region: 2-58
Classification Level Classification E-value
Superfamily KRAB domain (Kruppel-associated box) 7.32e-24
Family KRAB domain (Kruppel-associated box) 0.0014
Further Details:      
 
Domain Number 3 Region: 420-476
Classification Level Classification E-value
Superfamily beta-beta-alpha zinc fingers 1.2e-22
Family Classic zinc finger, C2H2 0.0085
Further Details:      
 
Domain Number 4 Region: 330-382
Classification Level Classification E-value
Superfamily beta-beta-alpha zinc fingers 5.53e-16
Family Classic zinc finger, C2H2 0.0071
Further Details:      
 
Domain Number 5 Region: 204-261
Classification Level Classification E-value
Superfamily beta-beta-alpha zinc fingers 0.00000000000014
Family Classic zinc finger, C2H2 0.011
Further Details:      
 
Domain Number 6 Region: 462-508
Classification Level Classification E-value
Superfamily beta-beta-alpha zinc fingers 0.00000000000276
Family Classic zinc finger, C2H2 0.016
Further Details:      
 
Domain Number 7 Region: 370-417
Classification Level Classification E-value
Superfamily beta-beta-alpha zinc fingers 0.000000000261
Family Classic zinc finger, C2H2 0.015
Further Details:      
 
Domain Number 8 Region: 132-180
Classification Level Classification E-value
Superfamily beta-beta-alpha zinc fingers 0.0000000375
Family Classic zinc finger, C2H2 0.028
Further Details:      
 
Weak hits

Sequence:  ENSMEUP00000013962
Domain Number - Region: 257-281
Classification Level Classification E-value
Superfamily beta-beta-alpha zinc fingers 0.0357
Family Classic zinc finger, C2H2 0.013
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score
Biological Process IC (bits) H-Score

Protein sequence

External link(s) Protein: ENSMEUP00000013962   Gene: ENSMEUG00000015295   Transcript: ENSMEUT00000015339
Sequence length 517
Comment pep:novel genescaffold:Meug_1.0:GeneScaffold_9663:10377:54486:1 gene:ENSMEUG00000015295 transcript:ENSMEUT00000015339 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence
QLVTFKDVAVDFTQDEWRQLSLAQRDLYRDMMLENYRNLVSLGLLVFQPDVLSQLQRGEV
PWIPEGDAPRGTCPDGETRLEIRKTASKEHFCESITTPRFMCDGHSDFSWREICQGKKKQ
KGLNEDGKSFRQSSVLTHREGLLEMQNYQCNECEMTFRLNSELIRHQKGHPREMLYMCKM
RSHKVIDTQFKGGKHYECVECDKSFKQQLSLTHHQELHSSQNLYKCMQCGRTFRQHSSRI
SHQRIHTRNKSHECHKLGKTFNVHLVRHRKIHSGKKSYECNQCGKTFRYNSNPIVHHRIH
TGEKPYECNQCEKAFRRSSHLVVHQRSHTGEKPYECNQCGKAFHAAPVLHQRIHTGEKHY
ECNQCGKAYRQALIAHQRIHTKKPYEYNQCGKTFSFSSWLTLYQRIYPGAPYECNHCVHF
RCSYSLDKHQRIYTGEKPYKCNHCGKSFRQSSSLTLHQRINTGEKPYYCSQCGKNFRCSL
ALAVHQSIHTGMRLYFYCGKYFTQYSSLAEQKLCTGE
Download sequence
Identical sequences ENSMEUP00000013962 ENSMEUP00000013962

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]