SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for Medtr2g010870.1 from Medicago truncatula

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  Medtr2g010870.1
Domain Number 1 Region: 188-356
Classification Level Classification E-value
Superfamily ADP-ribosylation 5.18e-17
Family Poly(ADP-ribose) polymerase, C-terminal domain 0.061
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Cellular Component IC (bits) H-Score
Biological Process IC (bits) H-Score
Molecular Function IC (bits) H-Score

Protein sequence

External link(s) Medtr2g010870.1
Sequence length 368
Comment | C2H2-like zinc finger protein | HC | chr2:2562022-2566589 | 20130731
Sequence
MPFEGFKNTRKWGTKWLKFVFLSRGSFNANHNQNKFMIQRHLGTKKVISISISIFKFMIQ
SKDLEGTFRTTRRASASSSSRLTNHVDDYDEENVSSRTRLLVEMDSEDCCPSILICYKCG
EKLKNLTAVEAHHITEHSVTELEEDSSRQIVGIICGNGTNLVSSELRQIDCILKVHNMPK
TLACFEEYREIVKINANKLHVNHPRCLADGNELLMFHGTNIACSLGINNSFSLCDLDYCG
VCQILRHGFSTNMEFQGAQGRNGPEGALGVYTTSISGKAFESIIRLCDDEAFTRKSVIVC
RVIAGRVLCPLEEIQENVDSGFDSLAGRISVYSDIEELYLLNPKALLPCFVVIYKQQKME
IRRRHSIA
Download sequence
Identical sequences G7IK26
Medtr2g010870.1 XP_003593385.2.50012

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]