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Domain assignment for Medtr2g063837.1 from Medicago truncatula

Domain architecture


Domain assignment details

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Strong hits

Sequence:  Medtr2g063837.1
Domain Number 1 Region: 129-292
Classification Level Classification E-value
Superfamily HAD-like 7.84e-34
Family NLI interacting factor-like phosphatase 0.0092
Further Details:      
 
Domain Number 2 Region: 211-230,353-438
Classification Level Classification E-value
Superfamily BRCT domain 7.12e-16
Family DNA topoisomerase II binding protein 1, TopBP1 0.048
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Molecular Function IC (bits) H-Score
Biological Process IC (bits) H-Score
Cellular Component IC (bits) H-Score

Protein sequence

External link(s) Medtr2g063837.1
Sequence length 440
Comment | carboxy-terminal domain phosphatase-like protein | LC | chr2:26986203-26991064 | 20130731
Sequence
MAVIQMSDDETEFPDSTDSSGSTDELIEKLEDELDDDGSDNSSSDEEAESQDSRIKRLKS
DSTSETKASTSAGTAEQKLDGCMHPGSFGGICIHCGQKVDGESGVSFGYIHKGLKLDDKE
ISRVRSRDVKNLLNRRKLCLVLDLDHTLLNTTSLHRLSPEEMHLKTHTDSLEDISKGSLF
MLEHVQVMTKLRPFVRTFLKEASEMFEMYIYTMGDRQYSLEMARLLDPQGEYFKDKVISR
DDGTQKNVKDLDLVLGTENSIIILDDKEEVWPKYRDNLILMERYHFFNSSCQDFGLQCKS
LAALNIDENENDGALAKILEVLRQINYKFFDELQGDLVDRDVRQVLSSFRGEVLRGCVIV
FSLNFHGDLRILRRIAERLGATCLKKLDPTVTHVIGTDFVTKESRWAVQEKKFLVSRRWL
EAANFFLQKQPEENFLVKIH
Download sequence
Identical sequences A0A072V9Y6
Medtr2g063837.1 XP_013464173.1.50012

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