SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for Medtr2g094570.1 from Medicago truncatula

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  Medtr2g094570.1
Domain Number 1 Region: 158-266
Classification Level Classification E-value
Superfamily DNA-binding pseudobarrel domain 1.7e-29
Family B3 DNA binding domain 0.0015
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Cellular Component IC (bits) H-Score
Biological Process IC (bits) H-Score
Molecular Function IC (bits) H-Score

Protein sequence

External link(s) Medtr2g094570.1
Sequence length 755
Comment | auxin response factor 1 | HC | chr2:40353672-40350058 | 20130731
Sequence
MKLVSLIDEVNKLKFLSFFCGVGRNHVCGAKEATNTLFYRTFFTQLKEQSNQNLKPMKVA
EKSLDPQLWHACAGGMVQMPSVNTKVFYFPQGHAEHAQSNVDFGDSFRIPPLILCRVASV
KFLADSETDEVFSKITLIPLRNSELENDDSDGDGSENSEKPASFAKTLTQSDANNGGGFS
VPRYCAETIFPRLDYSAEPPVQTVIAKDVHGEVWKFRHIYRGTPRRHLLTTGWSSFVNQK
KLVAGDSIVFLRAESGELFVGIRRAKRGIVNGLETPSGWSSGNGNCGLGPYGGAFTAFLR
EENKLGGVGGNLGGGRVKVSGESVKEAMRLAASNQTFEVVYYPRASTPEFCIKTSAVKAA
MRIQWCSGMRFKMPFETEDSSRISWFMGTISSVQVVDPIRWPNSPWRLLQVTWDEPDLLH
NVKRVSPWLVELVSNMSMIHLAPFSPPRKKLRFPQHPDFPLDVVQFQIPTFSGNPFNPLC
CLSSSDNYNAPAAGIQGARHAQIGISLSDLHLNNNKFQLGVFPNNRETISNVSNITTNHD
NKSKESISCLLTIGNSHKRSLEIKSDNNDNRHQFLLFGQPILTEQQISRKDSSDDVLLSK
KKDKEKWFFSDTTQSSISEQFSPAKSSTTSASADFCWQLGLDTGHCKVFLESEDVGRTLD
LSCVGSYEELYRKLAKMFGIERSEMLSRVLYRDATGAVKQTGEEPFSDFMKTAKRLTILM
DSGSKDTRRVCITGTRNAERGLDASNKTGPMSIFV
Download sequence
Identical sequences G7IRU1
XP_003597256.1.50012 Medtr2g094570.1

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]