SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for Medtr3g101520.1 from Medicago truncatula

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  Medtr3g101520.1
Domain Number 1 Region: 127-225
Classification Level Classification E-value
Superfamily DNA-binding pseudobarrel domain 3.92e-24
Family B3 DNA binding domain 0.0072
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Molecular Function IC (bits) H-Score
Biological Process IC (bits) H-Score
Cellular Component IC (bits) H-Score

Protein sequence

External link(s) Medtr3g101520.1
Sequence length 231
Comment | B3 domain transcription factor | HC | chr3:46725903-46730052 | 20130731
Sequence
mvakassyeesrrkrmeenqkrmealsltklsqslhkssspiskpspskprtpikkelvv
vrrsgrvanmpapvykeilidsvkiprnrisrcggydkyrdyskrvyasdearmeameka
dkllsdldsdhptfvksmlqshvtggfwlglpnhfcrknlpkrdevmtlidedgdesptt
ylahktglsagwrgfaiahnlvdgdalifelvkrtafkvyiirvnegkqdd
Download sequence
Identical sequences G7J6B9
Medtr3g101520.1 Medtr3g101520.4 XP_003603025.1.50012

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]