SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for Medtr4g023500.3 from Medicago truncatula

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  Medtr4g023500.3
Domain Number 1 Region: 87-249
Classification Level Classification E-value
Superfamily ADP-ribosylation 8.06e-39
Family Tpt1/KptA 0.01
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Molecular Function IC (bits) H-Score
Biological Process IC (bits) H-Score
Cellular Component IC (bits) H-Score

Protein sequence

External link(s) Medtr4g023500.3
Sequence length 253
Comment | RNA 2'-phosphotransferase, Tpt1/KptA family protein | HC | chr4:7946430-7952031 | 20130731
Sequence
MLFSSVRYSSIIVLRHYNLLPPRVSLLLRFFASVPPPTPMDNNRATPSSSGNSRGRAFDT
RNDRERTRGRGGGSGPSGSGKDKIDALGRLLTRILRHMASELKLNMRSDGFVNVNDLLKL
NLKTFANIPLRSHTIDDIREAVRKDNKQRFSLVEENGELLIRANQGHTTTAVETESLLKP
ILSAEEFPVCVHGTYKRNLDSILASGLKRMKRLHVHFSRGLPTDGEVISGMRRDVNVLIY
LDVRKALEGMIIF
Download sequence
Identical sequences A0A072UJ06
Medtr4g023500.3 XP_013455040.1.50012

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]