SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for Medtr4g052530.2 from Medicago truncatula

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  Medtr4g052530.2
Domain Number 1 Region: 189-386
Classification Level Classification E-value
Superfamily Zn-dependent exopeptidases 3.47e-25
Family FolH catalytic domain-like 0.019
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Molecular Function IC (bits) H-Score
Biological Process IC (bits) H-Score
Cellular Component IC (bits) H-Score

Protein sequence

External link(s) Medtr4g052530.2
Sequence length 584
Comment | M28 Zn-peptidase nicastrin | HC | chr4:19038593-19048799 | 20130731
Sequence
MATVSKKPRNREILFDSVIALVFILVACVDLCDGATVVDVYRLIQYDISGVPFGSRLASI
NHHAASLHFAPSADLSRTVLLIPLRELNMSFVQEYIGGSKPLGGLIFLLPQIFSFKNKGG
ASSNHDDGSKEPLKNVLDKLEQILIHTNLPYPVYFAFEDDNIDTVLLDIKKNDASGQPAT
ATTGGYKFVVSATEPKKVGSPPITNIQGWLPGLKTDGDSHQLPTIAIVASYDTFGAAPAL
SVGSDSNGSGIVALLEVARLFSLLYSNPKTRGQYNLLFGLTSGGPYNYNGTRKWLQSFDQ
RLRESIDYAICLDSIGSWENDLWIHVSKPPENAFIKQILEDFSSVAEDLGFQVNLKHKKI
NISNPRVAWEHEQFSRLRVTAATLSELSTAPELLQSTGGLVDGRQFVNEAAIVRSVKLIA
ESLAKHIYGHQGKNVQIFADNSNLAVNPSYIRSWLDVLSRTPRVAPFLSKDDPFITALKK
LEAFLLVSLVYSSKYFACLKELEDHTDEVNLQREVLDGMFTFYDSTTAQLNIYQVASVTF
DLLLLLVLGSYLIVLFSFLVITTRGLDDLISLFRRPPSRKMKTA
Download sequence
Identical sequences A0A072UJA6
XP_013455798.1.50012 Medtr4g052530.2

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]