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Domain assignment for Medtr4g121140.1 from Medicago truncatula

Domain architecture


Domain assignment details

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Strong hits

Sequence:  Medtr4g121140.1
Domain Number 1 Region: 132-310
Classification Level Classification E-value
Superfamily HAD-like 6.05e-33
Family NLI interacting factor-like phosphatase 0.011
Further Details:      
 
Domain Number 2 Region: 356-441
Classification Level Classification E-value
Superfamily BRCT domain 2.62e-21
Family DNA topoisomerase II binding protein 1, TopBP1 0.022
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Cellular Component IC (bits) H-Score
Biological Process IC (bits) H-Score
Molecular Function IC (bits) H-Score

Protein sequence

External link(s) Medtr4g121140.1
Sequence length 447
Comment | carboxy-terminal domain phosphatase-like protein | HC | chr4:50177925-50171180 | 20130731
Sequence
MSVVTDSPAHSSGSDDFISYLNDALDASSPDSSADEEAETQDEFEDVRNKRRKLESTEET
EGSTSEGIMEHKLVVAESSVKVDVCTHPGSFGEMCIRCGQKLDGESGVTFGYIHKGLRLH
DEEISRLRNTDMKKYLFSKKLYLVLDLDHTLLNTTILGHLSSEELHLLNETDSLEDVSKG
SLFKLEHMHMMTKLRPFVRTFLKEASEMFEMYIYTMGDRPYALEMAKLLDPQGEYFNSKV
ISRDDGTQRHQKGLDIVLGQESAVLILDDTEHAWMKHKNNLILMERYHFFASSCRQFGFN
CKSLAETKSDENETDGALAKILEMLKEVHCTFFDKLQGDLVDRDVRQVLSSVRGKILSGC
VIIFSRINHGALPTLKRIAEQMGATCLMELDPTVTHVVATDAGTEKSRWAVKEKKFLVHP
RWIEAANYFWQKQPEENFVVKKTTNPL
Download sequence
Identical sequences A0A072UR90
XP_013458303.1.50012 Medtr4g121140.1

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