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Domain assignment for NP_001004882.1.99540 from NCBI 2017_08 genome

Domain architecture


Domain assignment details

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Strong hits

Sequence:  NP_001004882.1.99540
Domain Number 1 Region: 361-453
Classification Level Classification E-value
Superfamily PH domain-like 1.51e-17
Family Pleckstrin-homology domain (PH domain) 0.013
Further Details:      
 
Domain Number 2 Region: 254-307
Classification Level Classification E-value
Superfamily Second domain of FERM 0.000000432
Family Second domain of FERM 0.01
Further Details:      
 
Domain Number 3 Region: 16-93
Classification Level Classification E-value
Superfamily Ubiquitin-like 0.000048
Family Ras-binding domain, RBD 0.048
Further Details:      
 
Weak hits

Sequence:  NP_001004882.1.99540
Domain Number - Region: 502-544
Classification Level Classification E-value
Superfamily Second domain of FERM 0.00251
Family Second domain of FERM 0.0064
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Molecular Function IC (bits) H-Score
Biological Process IC (bits) H-Score
Cellular Component IC (bits) H-Score

Protein sequence

External link(s) NP_001004882.1.99540
Sequence length 560
Comment fermitin family homolog 3 [Xenopus tropicalis]; AA=GCF_000004195.3; RF=representative genome; TAX=8364; STAX=8364; NAME=Xenopus tropicalis; strain=Nigerian; AL=Chromosome; RT=Major
Sequence
MAGIKTSSGEYIDSSWELKIYVEDMGPDADPVTFRVTGETHIGGVILQAVEKIGISQDWS
DHAIWWQQKCQWLLKTSWTLDKYGVLADARLIFTSQHKPVILSLPNQRSLRIRVCFSSTT
FSACAEVCKVLGIRYPEELSFLKAPEDKEKKKKKKDPVTQEIFDLTSLQPSDGSAVLLQQ
GGIPAHFLASPEAQEGYRALSVCQTALTPEDIQKRYKPITVTDKTLIHGRWLNSSKSLMQ
QGVQEGDRLWLHFKYYTFHDLDPKLDVVRINLLFEQARWAVLLEETECTEEEMMVFAALQ
YHVNKLSVTSNPMDLPQDPALQDLEEALSNLEVKMDANTPSEALEGIQLEPGLQEYLRVF
RPKKMTLKGYKQNWVLLKDTNLSCYKSKEETRGEPLIMFGLKGCEVIPEVNISSQKFCIR
LLVPTPEGMNEVYLRCDDEQQYARWMAGCRLAAKGRTMGDASYEGEVQSVLSFLNLQKST
TTQSNTTASDSINVHALVSPRFQKKLKPKQLTPRILEAYQNIAQLSLIDAKQRFIQAWQS
LPDFGVSYFLVRFPLNSQST
Download sequence
Identical sequences Q6DJA9
NP_001004882.1.99540 ENSXETP00000057639 gi|49523130|gb|AAH75273| gi|52345670|ref|NP_001004882|

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