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Domain assignment for NP_001005393.1.45394 from NCBI 2017_08 genome

Domain architecture


Domain assignment details

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Strong hits

Sequence:  NP_001005393.1.45394
Domain Number 1 Region: 578-781
Classification Level Classification E-value
Superfamily Fibronectin type III 2.36e-33
Family Fibronectin type III 0.000013
Further Details:      
 
Domain Number 2 Region: 322-412
Classification Level Classification E-value
Superfamily Immunoglobulin 8.64e-23
Family I set domains 0.0046
Further Details:      
 
Domain Number 3 Region: 236-319
Classification Level Classification E-value
Superfamily Immunoglobulin 4.7e-18
Family I set domains 0.032
Further Details:      
 
Domain Number 4 Region: 476-555
Classification Level Classification E-value
Superfamily Fibronectin type III 0.00000000000000249
Family Fibronectin type III 0.0017
Further Details:      
 
Domain Number 5 Region: 141-219
Classification Level Classification E-value
Superfamily Immunoglobulin 0.000000000000649
Family I set domains 0.073
Further Details:      
 
Domain Number 6 Region: 40-128
Classification Level Classification E-value
Superfamily Immunoglobulin 0.00000000000136
Family I set domains 0.017
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Biological Process IC (bits) H-Score
Molecular Function IC (bits) H-Score
Cellular Component IC (bits) H-Score

Protein sequence

External link(s) NP_001005393.1.45394
Sequence length 1032
Comment brother of CDO precursor [Danio rerio]; AA=GCF_000002035.6; RF=reference genome; TAX=7955; STAX=7955; NAME=Danio rerio; AL=Chromosome; RT=Major
Sequence
MSGTLNWIPWERKRKIRVLCSLCVLLFCLQDSNAVTDDVPVFTEEPFSVVQKLGGSVTLR
CSALPNHVNISWHLNGRELPAGGDEELGVLVRPGSLYIPSLTNLTVGRYQCVATTSVGSC
ASVPANVTAAKLRDFEPDDQQEIEVDEGNTAVIECHLPESQPKAQVRYSVKQEWLETSKG
NYLIMPSGNLQIANATRDDEGPYICAAYNPVTQEIKTSTSTDRLRIRRSTSEAARIIYPP
ASRSIMVNKGQRLVLECVASGIPTPQVTWAKDGLDLRNHNNTRFLLSNLLIDAASESDSG
TYVCLADNGIGSTSSAQVLYDVQVFEPPQVRVELQQQDVAWGDTVRFSCQVRGKPAPTVV
WLHNAQPLSPSPRHRVSAQVLRVLNVGPQDDGMYQCMAENGVGSSQAATRLLTLPTVPSR
KMPMIRPLSPDKVLREQPPLKPPVSTSAVLPFDCSEVRVSPAEAPVILSQPRTGKADYYE
LTWKPRHDGGAPVLEYIIKYRKAGESPGEWTTNTISGSQHKLILTKLQPASLYEVEMAAR
NCAGLGQPAMMTFRTGKWRRGGPIGPPKTPVVQPRLSPPEAPDRPTVSMATETSAYVTWI
PRGNRGFPIQSFRVEHKKLRKGSGDWEVAVNNIPPSRLSVEVTGLEKGTSYKFRVLAVNV
LGASPPSAPSKAYTVVGSGPPNRRPIDGPYITYNEAINETTIILKWTYTPLNNTPIYGFY
IFYRPTDSDNDSDYKKDVVEGDRYWHSITDLQPETAYDIKMQCFNEGGESEFGNVVILET
KARPHQRTTPPETASSRPEHPGNPVPRPGDLPYLIVGVVLGAFVFIIVAFIPICLWRVWA
KQKQTLDMRFPTLAATVSPCQYTMVPLQGLALGRACPVDPHLSPSHTVYAPKAEYIPNGK
HAAQRLPPGHQEDPNYELECDALLPQDLPNQQQNIHNYCNGVPGCPEEGFCVSDDSPLRL
FSLSDAPLESQDDHSLNECIHTEEELTADLTLLSIAEASINRLLQQAEPQQEGTTENTKQ
LEEQGTHDPEDG
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Identical sequences Q8UVD6
NP_001005393.1.45394

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