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Domain assignment for NP_001008005.1.99540 from NCBI 2017_08 genome

Domain architecture


Domain assignment details

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Strong hits

Sequence:  NP_001008005.1.99540
Domain Number 1 Region: 84-95,187-425
Classification Level Classification E-value
Superfamily Nuclear receptor ligand-binding domain 9.7e-51
Family Nuclear receptor ligand-binding domain 0.00023
Further Details:      
 
Domain Number 2 Region: 12-93
Classification Level Classification E-value
Superfamily Glucocorticoid receptor-like (DNA-binding domain) 1.94e-27
Family Nuclear receptor 0.00016
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Biological Process IC (bits) H-Score
Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score

Protein sequence

External link(s) NP_001008005.1.99540
Sequence length 435
Comment nuclear receptor subfamily 6 group A member 1 [Xenopus tropicalis]; AA=GCF_000004195.3; RF=representative genome; TAX=8364; STAX=8364; NAME=Xenopus tropicalis; strain=Nigerian; AL=Chromosome; RT=Major
Sequence
MDTWEDDRVDQRACLICGDRATGLHYGIISCEGCKGFFKRSICNKRVYRCSRDKNCVMSR
KQRNRCQYCRLLKCLQMGMNRKAIREDGMPGGRNKSIGPVQISDEEIERIMSGQEFEEEA
NTSWSNNGDSDHSSPGNGVSESNQPSPVSTPSSSRSMELNGFGSLRDQYLGTPGPMHYQY
LPHLFSYSAHPTLIPTQSRSLDPQSHTLINQLLTAEDIEPLSTPMLIEDGYKVTQSELFA
LLCRLADELLFRQITWVKKLPFFCDLSIKDYTCLLSTTWQELILLSSLTTYSKQIFGDLA
DVTSKYSPSEDELHRFSEDGMEVMERLIYLFRKFSQLKVSNEEYVCMKAINFLNQDIQGI
SSVSQVEQLNKRYWYVCQDFTEYRYPHQPNRFPDLMMCLPEVRYIAGKLVNVPLEQLPLL
FKAFLHSCKTSLTKE
Download sequence
Identical sequences A0A1B8YA22 Q66JK1
ENSXETP00000018759 NP_001008005.1.99540 gi|51703824|gb|AAH80883| gi|56118937|ref|NP_001008005| gi|82198466|sp|Q66JK1| gi|89268659|gb|CAJ83090| ENSXETP00000018759

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