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Domain assignment for NP_001014787.1.100692 from NCBI 2017_08 genome

Domain architecture


Domain assignment details

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Strong hits

Sequence:  NP_001014787.1.100692
Domain Number 1 Region: 27-126
Classification Level Classification E-value
Superfamily Immunoglobulin 0.0000000000047
Family V set domains (antibody variable domain-like) 0.031
Further Details:      
 
Domain Number 2 Region: 305-407
Classification Level Classification E-value
Superfamily Immunoglobulin 0.00000000252
Family V set domains (antibody variable domain-like) 0.02
Further Details:      
 
Domain Number 3 Region: 163-284
Classification Level Classification E-value
Superfamily Immunoglobulin 0.000000396
Family V set domains (antibody variable domain-like) 0.028
Further Details:      
 
Domain Number 4 Region: 447-552
Classification Level Classification E-value
Superfamily Immunoglobulin 0.00000643
Family V set domains (antibody variable domain-like) 0.021
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Biological Process IC (bits) H-Score
Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score

Protein sequence

External link(s) NP_001014787.1.100692
Sequence length 611
Comment immunoglobulin superfamily member 8 precursor [Rattus norvegicus]; AA=GCF_000001895.5; RF=representative genome; TAX=10116; STAX=10116; NAME=Rattus norvegicus; strain=mixed; AL=Chromosome; RT=Major
Sequence
MGVPSPTPLSSLLLLLLILGARCYARQVHVPKGPLYRVAGTAVSISCNVSDYEGPSQQDF
EWFMYRPEAPATSLGIISTKDSQFSYAVFGPRVASGDLQVQRLKGDSVVLKIARLQAQDS
GFYECYTPSTDTQYLGNYSAKVELRVLPDELQVSAAPPGPRGRQVATSPSRLTVHEGQEL
ALGCLAQTKTKKHTHLSVSFGRAIPEAPVGRATLQEVVGLRSDMAVEAGAPYAERLVAGE
LRLSKEGTDRYRMVVGGAQAGDSGTYHCTAAEWIQDPDGSWVQVAEKRAVLAHVDVQTLS
SQLAVTVGPGERRIGPGEPLELLCNVSGALPPAGRHAAYSVGWEMAPAGAPGPGRLVAQL
DTEGIGSLGPGYEDRHIAMEKVASRTYRLRLEAARPADAGTYRCLAKAYVRGSGTRLREA
ASARSRPLPVHVREEGVVLEAVAWLAGGTVYRGETASLLCNISVRGGPPGLRLAASWWVE
RPEEGELSSGPAQLVGGVGQDGVAELGVRPGGSPVSVELVGPRSHRLRLHSLGPEDEGIY
HCAPSAWVQHADYSWYQAGSARSGPVTVYPYTHALDTLFVPLLVGTGVALVTGASILATI
TCCFMKRLRKR
Download sequence
Identical sequences A0A140TAA1
NP_001014787.1.100692 NP_001014787.1.4139 XP_017454319.1.100692 ENSRNOP00000010028

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