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Domain assignment for NP_001029746.1.76553 from NCBI 2017_08 genome

Domain architecture


Domain assignment details

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Strong hits

Sequence:  NP_001029746.1.76553
Domain Number 1 Region: 281-452
Classification Level Classification E-value
Superfamily Concanavalin A-like lectins/glucanases 9.1e-60
Family SPRY domain 0.0000149
Further Details:      
 
Domain Number 2 Region: 5-82
Classification Level Classification E-value
Superfamily RING/U-box 1.44e-19
Family RING finger domain, C3HC4 0.014
Further Details:      
 
Domain Number 3 Region: 85-144
Classification Level Classification E-value
Superfamily B-box zinc-binding domain 0.00000000000000229
Family B-box zinc-binding domain 0.0016
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Molecular Function IC (bits) H-Score
Biological Process IC (bits) H-Score
Cellular Component IC (bits) H-Score

Protein sequence

External link(s) NP_001029746.1.76553
Sequence length 460
Comment E3 ubiquitin-protein ligase TRIM38 [Bos taurus]; AA=GCF_000003055.6; RF=representative genome; TAX=9913; STAX=9913; NAME=Bos taurus; breed=Hereford; AL=Chromosome; RT=Minor
Sequence
MASKKMREEATCSICLHLMTNAVSISCGHSYCHVCIVSFFENLNRMTPGLKTFSCPQCRA
PFTMASLRPNKQLGNLIEVIKEMDQEMSCEEHGEKLHLFCEDEGQLICWLCDRGAQHKGH
ATALVEEACQGYKEKLQQAVTKLRQLEEECMNLKVFTAEQITKWNEKIEFQKQKIQSDFK
TLQRFLHEEEKSYLWKLEKEKEQTLRRLRDNEANLEQKNHELQSHILELENKCQGSAQKL
LQDVKDTLSRSWAVKLEQPEALSLDLHTVCNVSELYFDVKKMLRRHQVSVTLDPETAHYE
LILSEDRRQVIRGCPQENLDNSSRRFSALPCILGYEGFTSGKHYFEVDVGEGTGWDLGVC
MENVQRDTVMPQTPQSGFWAIRRCKEGYVALTSPLTSIHLTEKPLVVGIFLDFEAGVVSF
YNMTTGSHIFTFPKASFSDTLRPYFQVYLYSPLFLPPPDE
Download sequence
Identical sequences Q58DK8
ENSBTAP00000024658 ENSBTAP00000024658 9913.ENSBTAP00000024658 NP_001029746.1.59421 NP_001029746.1.76553 XP_010816785.1.76553 XP_015315443.1.76553

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