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Domain assignment for NP_001071903.1.78797 from NCBI 2017_08 genome

Domain architecture


Domain assignment details

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Strong hits

Sequence:  NP_001071903.1.78797
Domain Number 1 Region: 413-576
Classification Level Classification E-value
Superfamily P-loop containing nucleoside triphosphate hydrolases 1.55e-44
Family G proteins 0.00000699
Further Details:      
 
Domain Number 2 Region: 25-81
Classification Level Classification E-value
Superfamily RING/U-box 0.0000000000559
Family RING finger domain, C3HC4 0.021
Further Details:      
 
Domain Number 3 Region: 180-237
Classification Level Classification E-value
Superfamily B-box zinc-binding domain 0.00000000824
Family B-box zinc-binding domain 0.004
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Biological Process IC (bits) H-Score
Molecular Function IC (bits) H-Score
Cellular Component IC (bits) H-Score

Protein sequence

External link(s) NP_001071903.1.78797
Sequence length 585
Comment zinc finger protein [Ciona intestinalis]; AA=GCF_000224145.2; RF=representative genome; TAX=7719; STAX=7719; NAME=Ciona intestinalis; AL=Chromosome; RT=Major
Sequence
MTMSTSSSNLLELMPRKRQRSTDNWATSVLECGVCGEQFSLSGEKVPRLLLCGHSFCHDC
LTRLPVQAHTLVCPMDRQITDVGSGGVWGLKKNFALIELMEKLQLGGTRINLSKSDTPSN
SKVESRDNEDKKIVCCDEDEKHAATLYCLVCCTNLCNACSTSTHSTKTLSKHRRISLEDK
PQQPAMCPLHQTHALEFACLEEGCQYSPAMCYLCKEHGKHKGHQHNLIEVVARSARSTAA
EASERASAFLAQVVEHIMRSQAALDRIEGGTRLSTSQSGVVERQQYSGSAESARTCVRDY
FCRLRESLASQEEVAISTLDTHVRNRITALRRLHDDATALRSQISTALSHCNNVSHQDDC
SILASRSEVDALDHMLDQQQRQFTEQTVAASETLDPSIPVTFTKDNRIHIGRKLEIRIVT
LGLDGAGKTTLLFKLKQDEFMQPIPTIGFNVETVDYRNLRFTVWDVGGKHKLRPLWKHYY
LNTQAVLFVVDSCDTQRFEEAHTELAKLMSEKDLREAALLVLANKQDLPGAASCDEVAAR
LNLHKLCCGRSWRAIPCDASSGAGLEEGLLWLSRQLVAAGVLEVA
Download sequence
Identical sequences Q1RPZ8
7719.ENSCINP00000007845 NP_001071903.1.78797

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