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Domain assignment for NP_001076447.1.45394 from NCBI 2017_08 genome

Domain architecture


Domain assignment details

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Strong hits

Sequence:  NP_001076447.1.45394
Domain Number 1 Region: 25-383
Classification Level Classification E-value
Superfamily L domain-like 2.99e-62
Family Ngr ectodomain-like 0.0016
Further Details:      
 
Domain Number 2 Region: 427-516
Classification Level Classification E-value
Superfamily Immunoglobulin 1.89e-20
Family I set domains 0.012
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Cellular Component IC (bits) H-Score
Biological Process IC (bits) H-Score
Molecular Function IC (bits) H-Score

Protein sequence

External link(s) NP_001076447.1.45394
Sequence length 618
Comment leucine rich repeat and Ig domain containing 4a [Danio rerio]; AA=GCF_000002035.6; RF=reference genome; TAX=7955; STAX=7955; NAME=Danio rerio; AL=Chromosome; RT=Major
Sequence
MTPNSLFVPQAGLQMCVAADWRRLYWWVVLQWVVGVATSGPCAQRCDCSPKLPLVDCSSQ
QLSAVPEGVPDATQVLNLTYNHLKTLSSRQFFSLRQLRELDLSANMLTVIEVEAFVGLQN
LITLRLSRNRLKIIPVGAFSGLPNVQFLDISENEILVLLDDMFGEMPSLQKLEASENDLV
FISNRAFSGLPNLLELRLERCNLTTVPSEAFSRLTGLQHLRFCRLGLTALPNNSFRQLQR
LQDLHVSRCPWLHTLAVNSLIGLNLTSLTLSHCNLSAVPYAPLHHLVYLRYLDLSYNPIT
TVLSGLLGDLLRLQELHLVSTGLLHVESGAFRNLAFFRLLNVSDNRLVTLEESAFHAVGS
LEVLRLDGNPLACDCRLLWVMRRRLRLRFAGHAPSCVSPVQVQGRMFQDFAESEVARTFT
CRQARILTRKPQDVRSDEGHTVLFFCAADGDPAPSIIWLNPKRSVLTASGRIRVLPNGTL
EVRYAQVQDSGYYLCIASNAAGNDSISVSLRVRGFPASSRNRSGSFFLDGWSFASGQTAV
NGSQPFPFDVKTLVIAVTMGFLSFLSSVALCFIFMFFWSQSKGQIKHTATIQFVPRSSAS
TTAGRSTVETGRFTMKLI
Download sequence
Identical sequences NP_001076447.1.45394

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