SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for NP_001082482.1.7800 from NCBI 2017_08 genome

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  NP_001082482.1.7800
Domain Number 1 Region: 121-226
Classification Level Classification E-value
Superfamily Immunoglobulin 1.71e-17
Family I set domains 0.018
Further Details:      
 
Domain Number 2 Region: 52-112
Classification Level Classification E-value
Superfamily Immunoglobulin 0.0000000928
Family I set domains 0.024
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Molecular Function IC (bits) H-Score
Cellular Component IC (bits) H-Score
Biological Process IC (bits) H-Score

Protein sequence

External link(s) NP_001082482.1.7800
Sequence length 290
Comment neuroplastin L homeolog precursor [Xenopus laevis]; AA=GCF_001663975.1; RF=representative genome; TAX=8355; STAX=8355; NAME=Xenopus laevis; strain=J; AL=Chromosome; RT=Major
Sequence
MARSEQPPLSAILFLGLLLVYCGLFPAPAYAQNEPKITATEEITIKKETSPTPIFLQCNL
TTTPNHVEPDSGFWTKNGLELQDTRKTPSDNILELKIAKPKADDSGEYMCVFILKNSPPA
NATIEVKAVPEISGHKKSENKNEGQEAVMYCKCVGYPPPDWMWYKIIDGGLMEINNATGR
FFITNKDNYTELKIINLDINNDPGTYLCNASNTVGSDNSTTILRVRSNLAPLWPFLGIVA
EIVILAVVIVVYEKRKRPDEVPDDDEPAGPMKSNSTNNHKDKNLRQRNTN
Download sequence
Identical sequences A0JMY2
NP_001082482.1.7800 XP_018106318.1.7800 gi|116487700|gb|AAI26049| gi|160333748|ref|NP_001082482|

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]