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Domain assignment for NP_001082850.1.45394 from NCBI 2017_08 genome

Domain architecture


Domain assignment details

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Strong hits

Sequence:  NP_001082850.1.45394
Domain Number 1 Region: 17-376
Classification Level Classification E-value
Superfamily L domain-like 2.04e-58
Family Ngr ectodomain-like 0.01
Further Details:      
 
Domain Number 2 Region: 413-503
Classification Level Classification E-value
Superfamily Immunoglobulin 1.21e-21
Family I set domains 0.02
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Biological Process IC (bits) H-Score
Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score

Protein sequence

External link(s) NP_001082850.1.45394
Sequence length 604
Comment leucine rich repeat and Ig domain containing 4b precursor [Danio rerio]; AA=GCF_000002035.6; RF=reference genome; TAX=7955; STAX=7955; NAME=Danio rerio; AL=Chromosome; RT=Major
Sequence
MFLDLCGQRGAWTVLLLWCLNLSAADLPCPQRCSCSRDPLEVNCSSRHLTAVPEGLPTNA
KRLDLSGNQLKTLARRQFSSLSKLEDLDLSENIISMIEVETFQGLKNLRYLRIKNNRLKI
LPVGVFSGLSNLRRLDISENEILVFLDYTFRDMINLQQLDAGENDLVFISQRAFVGLQAL
KELNVDRSNLTSIPTEALSQLQSLTKLRLRKLTISVLPNNAFRRLHQLRTLQILHWSSLE
MLNSNSLVGLNLTTLVLTNCNLSAIPYSPLRHLAYLQYLDLSYNPITSIQGNLLGDLLRL
QELHLVGGNLLRIEPGAFRGLSRFRLLNVSSNRLSTLEESAFHSVGNLQTLRLDRNPLAC
DCRLLWVMRRRRRLDFDGRQPTCSPLNHQRKAFRDFSEAELPVVFTCRQAQILNRQLQDI
SVIEGMRVHFDCKADGYPSPSITWLSAQQSALSSAGRVRVLTNGSLQISYAQVQDSGTYL
CSAANAAGNDSISVSLHVEGLPQNRTVSYFSDEGWIETSAPPSTNSSARVSSPYPFDAKT
LIIATTMGFLSFLSSVAICFVFMFFWSQSKGQIKHTATIDFVPRSSMGGGGDGGDTGRFT
MKLI
Download sequence
Identical sequences A3KH16
ENSDARP00000047930 7955.ENSDARP00000047930 ENSDARP00000047930 ENSDARP00000124928 NP_001082850.1.45394 XP_005158117.1.45394 XP_021322384.1.45394

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