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Domain assignment for NP_001085873.1.7800 from NCBI 2017_08 genome

Domain architecture


Domain assignment details

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Strong hits

Sequence:  NP_001085873.1.7800
Domain Number 1 Region: 119-146
Classification Level Classification E-value
Superfamily CCCH zinc finger 0.0000419
Family CCCH zinc finger 0.0045
Further Details:      
 
Weak hits

Sequence:  NP_001085873.1.7800
Domain Number - Region: 23-44
Classification Level Classification E-value
Superfamily CCCH zinc finger 0.000445
Family CCCH zinc finger 0.005
Further Details:      
 
Domain Number - Region: 235-283
Classification Level Classification E-value
Superfamily Delta-sleep-inducing peptide immunoreactive peptide 0.0915
Family Delta-sleep-inducing peptide immunoreactive peptide 0.01
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Biological Process IC (bits) H-Score
Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score

Protein sequence

External link(s) NP_001085873.1.7800
Sequence length 409
Comment zinc finger CCCH-type containing 10 S homeolog [Xenopus laevis]; AA=GCF_001663975.1; RF=representative genome; TAX=8355; STAX=8355; NAME=Xenopus laevis; strain=J; AL=Chromosome; RT=Major
Sequence
MPNRENGGSSGSGSEEAAGVVEHICRDFLRNVCKRGKRCRFKHPDAVDVSDLGVQKNEFV
FCHDFQNKECVRLNCRFIHGTKDDDEYYKKTGELPPRLRHKVAAGLGLSPTDLTNKDEVP
ICRDFLKGDCQRGDRCKFRHLQREYEHQYDYPCDMRGGMMNMGVSPGSLSAPTTRAYEHY
DRYDGLADTEYYSSYYRYGDRLDDPVMKRRRIGYDGYYSGSPVEYRLLEEENVMLRRRVE
DLKKQVSVLAATNEVLLDQNAQFRSQAKVVALSTLSATAPTSEQGVGSVTNYNHGIAQTH
TTLSSQALQPRAVTQQELVASTGASASAQSNAPQQLNPEITPLSAALAQTIAQSMAPPPV
SMAPVAVSVAPVAVSMAQPLPVITMSHASTPMVSYPIVSQSMRITALPH
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Identical sequences Q6GNP5
NP_001085873.1.7800 gi|147901335|ref|NP_001085873| gi|49116637|gb|AAH73459|

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