SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for NP_001092661.1.76553 from NCBI 2017_08 genome

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  NP_001092661.1.76553
Domain Number 1 Region: 137-226
Classification Level Classification E-value
Superfamily Immunoglobulin 2.36e-20
Family I set domains 0.0092
Further Details:      
 
Domain Number 2 Region: 262-436
Classification Level Classification E-value
Superfamily Fibronectin type III 5.91e-19
Family Fibronectin type III 0.003
Further Details:      
 
Domain Number 3 Region: 28-130
Classification Level Classification E-value
Superfamily Immunoglobulin 0.00000000000000121
Family I set domains 0.011
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score
Biological Process IC (bits) H-Score

Protein sequence

External link(s) NP_001092661.1.76553
Sequence length 1003
Comment roundabout homolog 4 precursor [Bos taurus]; AA=GCF_000003055.6; RF=representative genome; TAX=9913; STAX=9913; NAME=Bos taurus; breed=Hereford; AL=Chromosome; RT=Minor
Sequence
MGAGGARLLGVHWALPLLLLTGSMAQDFPPQILVHPEDQLFQGPDPAKMSCRASGQPPPT
IRWLLDGHPLSMVPPDVHHLLPDGTLLLLRPPPRGRAHDDHTRSTDLGVYTCEASNRLGT
AVSRGARLSMAVLQEDFQVQPRDTVAAVGEQVLLQCEPPWGHPEPTVSWWKDEKPLALQS
GRHSVSQGSLLMARAEKSDAGTYMCMATNSAGQRKSRVARVSIQEPRDYKEPLELLAVHI
QLENVTLLNPDPKKGTKPGPAVWLSWKVSGPAAPAQSYTALFRTQAAPGGQGAPWAEVLL
AGWQSAELGGLHWGQDYEFKVRPSSGRAQGPDSNVLLLRLPEQVPSAPPQEVTLKPGNGT
ILVSWIPPPAENHNGIIRGYQVWSLGNTSLPPANWTVVGEQTQLEIATRMSGSYCIQVAA
VTGAGAGQPSSPVCLLLEQAMERAAQQPSAHSPWTLEQLWAALKRPEVIASGGVVLWLLL
LGIAVCIHRRRRAGVRLGPGLYRYTSEDAILKHRMDHSDSPWLADTWRSTSGSRDLSSSS
SLSSRLGVDPRDPLDGRRSLISWDPRSPGVPLLPDTSTFYGSLIAEGPSSPPARPSPQAP
AARRLTPQLAQLSSPWPSSDSLCGRRGLSSPRLSLAPAEAWKARKKQELHQANSSPLLRA
SHPAELWACELGNRGSKNFSQSPGAVPRALVAWRALGPQLLSSSSELMTRPLPPVPLAPR
GPPTQSQQTQHSGEPPAPTSPPPPAAPVPALIPSGTLHVSSPQASSLSGPSPASSRLSSS
SLSSLGEDQDSVLTPEEVALCLELSDGEETPRNSVSPMPRAPSPPITYGYISVPTASDLA
DMGRPGGGVGSEVRGLLCPPRPCLTPTPSEGSLANGWGSASEDNGPSARASLVSSSDGSF
LADAHFARALAVAADSFGFGLEPREADCVFTDASSPPSPRDDLSLTSTLSLTPWEWRSDW
LEDIEKNPTQWLGRGLPPWLPETRISSQKSQLSSPVPKAGDSS
Download sequence
Identical sequences A6H7I1
NP_001092661.1.59421 NP_001092661.1.76553

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]