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Domain assignment for NP_001092976.1.4139 from NCBI 2017_08 genome

Domain architecture


Domain assignment details

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Strong hits

Sequence:  NP_001092976.1.4139
Domain Number 1 Region: 2-431
Classification Level Classification E-value
Superfamily Periplasmic binding protein-like I 3.06e-110
Family L-arabinose binding protein-like 0.00000767
Further Details:      
 
Weak hits

Sequence:  NP_001092976.1.4139
Domain Number - Region: 454-502
Classification Level Classification E-value
Superfamily TNF receptor-like 0.0133
Family TNF receptor-like 0.037
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Biological Process IC (bits) H-Score
Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score

Protein sequence

External link(s) NP_001092976.1.4139
Sequence length 821
Comment vomeronasal 2 receptor 47 [Rattus norvegicus]; AA=GCF_000002265.2; RF=na; TAX=10116; STAX=10116; NAME=Rattus norvegicus; strain=BN; Sprague-Dawley; AL=Chromosome; RT=Major
Sequence
MKTMIHTIKEINERKDILPNHTLGYQIFDTCFSISKTVESTFVFLTGQEEYKPNFRNSSG
KYLAGIIGSGGSSLSVASSRILEVYYMSQVGYTSSSSILSDHFRFPTFYRTIPSDKIQTE
AMVNLIKHFGWVWVGAIAADDDYGKYGIKSFKEKLERSNLCVAFSETIPKVYSNEKMQKA
INAVKSSTAKVVVLYATDIDLRPFVLEVVHHNITDRTWIASEAWITSALIAKPEYFPYFG
GTIGFAIPRSVIPGLKEFLYDVHPSKDPNDVLTIEFWQTAFNCTWPNSSVPYNVDYRGNM
TGKEDRFYAMSDRLCTGEEKLEDLKNTYLDTSQLRITNNVKQAVYLLAHALDRLSRCDVP
QPDVKCSQIPNFDPFELMIYIMRMEFTTHDGRKIELDRSGDVKNGYYDILNWQMDDAGEI
AFVKFGEYKFTSSKYELVLSKNSTLFWNTESSELPDSFCTKLCPPGTRKGIRQGKPTCCF
DCIPCADGYVSEKPGQRECDPCSEDDWSNAEKSKCVPKLVEFLSYEEALGFTLVILSIFG
ALVVMAVTVVYVIHRHTPLVKANDRELSFFIQMSLVITVLSSMLFIGKPCNWSCMARQVT
LALGFCLCLSSILGKTISLFFAYRISKSKTRLISMHPIFRKLIVLICVVGEIGVCTAYLV
LEPPRMFKNIEPQNVKIIFECNEGSIEFLYSIFGFNVLLALLCFLTTFVARQLPDNYYEG
KCITFGMLVFFIVWISFVPAYLSTKGKFKVAVEIFAILASSYGLLGCVFLPKCFIILLRP
KRNTDETVGGRVPTLDKSIQLTSASVSSELNNTAESIVLDE
Download sequence
Identical sequences F1MAL4
NP_001092976.1.100692 NP_001092976.1.4139 ENSRNOP00000054464

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