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  Home > Genomes > NCBI 2017_08 genome > NP_001099191.1.100692

Domain assignment for NP_001099191.1.100692 from NCBI 2017_08 genome

Domain architecture

Domain assignment details

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Strong hits

Sequence:  NP_001099191.1.100692
Domain Number 1 Region: 1862-2106
Classification Level Classification E-value
Superfamily Ankyrin repeat 1.49e-53
Family Ankyrin repeat 0.0000000566
Further Details:      
 
Domain Number 2 Region: 399-533
Classification Level Classification E-value
Superfamily Growth factor receptor domain 0.000000000000204
Family Growth factor receptor domain 0.012
Further Details:      
 
Domain Number 3 Region: 1170-1311
Classification Level Classification E-value
Superfamily Growth factor receptor domain 0.000000000000785
Family Growth factor receptor domain 0.0066
Further Details:      
 
Domain Number 4 Region: 856-987
Classification Level Classification E-value
Superfamily Growth factor receptor domain 0.00000000000722
Family Growth factor receptor domain 0.0086
Further Details:      
 
Domain Number 5 Region: 754-795
Classification Level Classification E-value
Superfamily EGF/Laminin 0.0000000000108
Family EGF-type module 0.0049
Further Details:      
 
Domain Number 6 Region: 629-757
Classification Level Classification E-value
Superfamily Growth factor receptor domain 0.0000000000455
Family Growth factor receptor domain 0.014
Further Details:      
 
Domain Number 7 Region: 528-570
Classification Level Classification E-value
Superfamily EGF/Laminin 0.0000000000481
Family EGF-type module 0.005
Further Details:      
 
Domain Number 8 Region: 791-828
Classification Level Classification E-value
Superfamily EGF/Laminin 0.000000000155
Family EGF-type module 0.0073
Further Details:      
 
Domain Number 9 Region: 983-1101
Classification Level Classification E-value
Superfamily Growth factor receptor domain 0.000000000188
Family Growth factor receptor domain 0.0088
Further Details:      
 
Domain Number 10 Region: 141-186
Classification Level Classification E-value
Superfamily EGF/Laminin 0.000000000201
Family EGF-type module 0.0099
Further Details:      
 
Domain Number 11 Region: 603-641
Classification Level Classification E-value
Superfamily EGF/Laminin 0.000000000522
Family EGF-type module 0.012
Further Details:      
 
Domain Number 12 Region: 295-333
Classification Level Classification E-value
Superfamily EGF/Laminin 0.00000000104
Family EGF-type module 0.0078
Further Details:      
 
Domain Number 13 Region: 1141-1184
Classification Level Classification E-value
Superfamily EGF/Laminin 0.00000000261
Family EGF-type module 0.012
Further Details:      
 
Domain Number 14 Region: 177-217
Classification Level Classification E-value
Superfamily EGF/Laminin 0.00000000584
Family EGF-type module 0.0045
Further Details:      
 
Domain Number 15 Region: 563-607
Classification Level Classification E-value
Superfamily EGF/Laminin 0.00000000675
Family EGF-type module 0.0066
Further Details:      
 
Domain Number 16 Region: 257-304
Classification Level Classification E-value
Superfamily EGF/Laminin 0.0000000126
Family EGF-type module 0.016
Further Details:      
 
Domain Number 17 Region: 104-140
Classification Level Classification E-value
Superfamily EGF/Laminin 0.0000000511
Family EGF-type module 0.026
Further Details:      
 
Domain Number 18 Region: 1308-1352
Classification Level Classification E-value
Superfamily EGF/Laminin 0.0000000967
Family EGF-type module 0.014
Further Details:      
 
Domain Number 19 Region: 1489-1522
Classification Level Classification E-value
Superfamily Notch domain 0.000000115
Family Notch domain 0.0052
Further Details:      
 
Domain Number 20 Region: 1529-1561
Classification Level Classification E-value
Superfamily Notch domain 0.000000183
Family Notch domain 0.0043
Further Details:      
 
Domain Number 21 Region: 332-372
Classification Level Classification E-value
Superfamily EGF/Laminin 0.000000237
Family EGF-type module 0.0081
Further Details:      
 
Domain Number 22 Region: 60-99
Classification Level Classification E-value
Superfamily EGF/Laminin 0.000000382
Family EGF-type module 0.02
Further Details:      
 
Domain Number 23 Region: 1390-1428
Classification Level Classification E-value
Superfamily EGF/Laminin 0.00000046
Family EGF-type module 0.02
Further Details:      
 
Domain Number 24 Region: 1448-1480
Classification Level Classification E-value
Superfamily Notch domain 0.00000106
Family Notch domain 0.00018
Further Details:      
 
Domain Number 25 Region: 219-261
Classification Level Classification E-value
Superfamily EGF/Laminin 0.00000151
Family EGF-type module 0.0087
Further Details:      
 
Domain Number 26 Region: 1112-1149
Classification Level Classification E-value
Superfamily EGF/Laminin 0.00000347
Family EGF-type module 0.022
Further Details:      
 
Domain Number 27 Region: 1345-1385
Classification Level Classification E-value
Superfamily EGF/Laminin 0.0000122
Family EGF-type module 0.016
Further Details:      
 
Weak hits

Sequence:  NP_001099191.1.100692
Domain Number - Region: 374-411
Classification Level Classification E-value
Superfamily EGF/Laminin 0.000272
Family EGF-type module 0.097
Further Details:      
 
Domain Number - Region: 25-58
Classification Level Classification E-value
Superfamily EGF/Laminin 0.000534
Family EGF-type module 0.031
Further Details:      
 
Domain Number - Region: 832-867
Classification Level Classification E-value
Superfamily EGF/Laminin 0.0101
Family EGF-type module 0.011
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Biological Process IC (bits) H-Score
Molecular Function IC (bits) H-Score
Cellular Component IC (bits) H-Score

Protein sequence

External link(s) NP_001099191.1.100692
Sequence length 2531
Comment neurogenic locus notch homolog protein 1 precursor [Rattus norvegicus]; AA=GCF_000001895.5; RF=representative genome; TAX=10116; STAX=10116; NAME=Rattus norvegicus; strain=mixed; AL=Chromosome; RT=Major
Sequence 
MPRLLAPLLCLTLLPALAARGLRCSQPSGTCLNGGRCEVANGTEACVCSGAFVGQRCQDP
SPCLSTPCKNAGTCYVVDHGGIVDYACSCPLGFSGPLCLTPLANACLANPCRNGGTCDLL
TLTEYKCRCPPGWSGKSCQQADPCASNPCANGGQCLPFESSYICGCPPGFHGPTCRQDVN
ECSQNPGLCRHGGTCHNEIGSYRCACRATHTGPHCELPYVPCSPSPCQNGGTCRPTGDTT
HECACLPGFAGQNCEENVDDCPGNNCKNGGACVDGVNTYNCRCPPEWTGQYCTEDVDECQ
LMPNACQNGGTCHNSHGGYNCVCVNGWTGEDCSENIDDCASAACFQGATCHDRVASFYCE
CPHGRTGLLCHLNDACISNPCNEGSNCDTNPVNGKAICTCPSGYTGPACSQDVDECALGA
NPCEHAGKCLNTLGSFECQCLQGYTGPRCEIDVNECISNPCQNDATCLDQIGEFQCICMP
GYEGVYCEINTDECASSPCLHNGRCVDKINEFLCQCPKGFSGHLCQYDVDECASTPCKNG
AKCLDGPNTYTCVCTEGYTGTHCEVDIDECDPDPCHYGLCKDGVATFTCLCQPGYTGHHC
ETNINECHSQPCRHGGTCQDRDNYYLCLCLKGTTGPNCEINLDDCASNPCDSGTCLDKID
GYECACEPGYTGSMCNVNIDECAGSPCHNGGTCEDGIAGFTCRCPEGYHDPTCLSEVNEC
NSNPCIHGACRDGLNGYKCDCAPGWSGTNCDINNNECESNPCVNGGTCKDMTSGYVCTCR
EGFSGPNCQTNINECASNPCLNQGTCIDDVAGYKCNCPLPYTGATCEVVLAPCATSPCKN
SGVCKESEDYESFSCVCPTGWQGQTCEIDINECVKSPCRHGASCQNTNGSYRCLCQAGYT
GRNCESDIDDCRPNPCHNGGSCTDGVNAAFCDCLPGFQGAFCEEDINECASNPCQNGANC
TDCVDSYTCTCPTGFNGIHCENNTPDCTESSCFNGGTCVDGINSFTCLCPPGFTGSYCQY
DVNECDSRPCLHGGTCQDSYGTYKCTCPQGYTGLNCQNLVRWCDSAPCKNGGKCWQTNTQ
YHCECRSGWTGFNCDVLSVSCEVAAQKRGIDVTLLCQHGGLCVDEEDKHYCHCQAGYTGS
YCEDEVDECSPNPCQNGATCTDYLGGFSCKCVAGYHGSNCSEEINECLSQPCQNGGTCID
LTNTYKCSCPRGTQGVHCEINVDDCHPPLDPASRSPKCFNNGTCVDQVGGYTCTCPPGFV
GERCEGDVNECLSNPCDPRGTQNCVQRVNDFHCECRAGHTGRRCESVINGCRGKPCRNGG
VCAVASNTARGFICRCPAGFEGATCENDARTCGSLRCLNGGTCISGPRSPTCLCLGSFTG
PECQFPASSPCVGSNPCYNQGTCEPTSESPFYRCLCPAKFNGLLCHILDYSFTGGAGRDI
PPPQIEEACELPECQEDAGNKVCNLQCNNHACGWDGGDCSLNFNDPWKNCTQSLQCWKYF
SDGHCDSQCNSAGCLFDGFDCQLTEGQCNPLYDQYCKDHFSDGHCDQGCNSAECEWDGLD
CAEHVPERLAAGTLVLVVLLPPDQLRNNSFHFLRELSHVLHTNVVFKRDAQGQQMIFPYY
GREEELRKHPIKRSAVGWATTSLLPGTNGGRQRRELDPMDIHGSIVYLEIDNRQCVQSSS
QCFQSATDVAAFLGALASLGSLNIPYKIEAVKSETVEPPLPSQLHLMYVAAAAFVLLFFV
GCGVLLSRKRRRQHGQLWFPEGFKVSEASKKKRREPLGEDSVGLKPLKNASDGALMDDNQ
NEWGDEDLETKKFRFEEPVVLPDLDDQTDHRQWTQQHLDAADLRVSAMAPTPPQGEVDAD
CMDVNVRGPDGFTPLMIASCSGGGLETGNSEEEEDAPAVISDFIYQGASLHNQTDRTGET
ALHLAARYSRSDAAKRLLEASADANIQDNMGRTPLHAAVSADAQGVFQILLRNRATDLDA
RMHDGTTPLILAARLAVEGMLEDLINSHADVNAVDDLGKSALHWAAAVNNVDAAVVLLKN
GANKDMQNNKEETPLFLAAREGSYETAKVLLDHFANRDITDHMDRLPRDIAQERMHHDIV
RLLDEYNLVRSPQLHGTALGGTPTLSPTLCSPNGYLGNLKSATQGKKARKPSTKGLACSS
KEAKDLKARRKKSQDGKGCLLDSSSMLSPVDSLESPHGYLSDVASPPLLPSPFQQSPSMP
LSHLPGMPDTHLGISHLNVAAKPEMAALAGGSRLAFEPPPPRLSHLPVASSASTVLSTNG
TGAMNFTVGAPASLNGQCEWLPRLQNGMVPSQYNPLRPGVTPGTLSTQAAGLQHGMMGPI
HSSLSTNTLSPIIYQGLPNTRLATQPHLVQTQQVQPQNLQIQPQNLQPPSQPHLSVSSAA
NGHLGRSFLSGEPSQADVQPLGPSSLPVHTILPQESQALPTSLPSSMVPPMTTTQFLTPP
SQHSYSSSPVDNTPSHQLQVPEHPFLTPSPESPDQWSSSSPHSNISDWSEGISSPPTSMP
SQITHIPEAFK
Download sequence
Identical sequences Q07008
NP_001099191.1.100692 NP_001099191.1.4139 ENSRNOP00000026212

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]
Please cite: Gough, J., Karplus, K., Hughey, R. and Chothia, C. (2001). "Assignment of Homology to Genome Sequences using a Library of Hidden Markov Models that Represent all Proteins of Known Structure." J. Mol. Biol., 313(4), 903-919.

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© Copyright 2013 The SUPERFAMILY authors and Julian Gough.